YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|115512869, gi...
Organism:	Escherichia coli APEC O1
Length:	308 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|115512869, gi....

Description	E-value	Query Range	Subject Range
gi\|186699681, gi... - gi\|186896655\|ref\|YP_001873767.1\| glutaminase [Yersinia pseudotuberculosis PB1/+], gi\|186699681\|gb\|AC... gi\|170023072, gi... - gi\|170023072\|ref\|YP_001719577.1\| glutaminase [Yersinia pseudotuberculosis YPIII], gi\|169749606\|gb\|AC... Q666M7\|Q666M7_YERPS - Putative glutaminase - Yersinia pseudotuberculosis gi\|51597531, gi\|... - gi\|51597531\|ref\|YP_071722.1\| glutaminase [Yersinia pseudotuberculosis IP 32953], gi\|51590813\|emb\|CAH...	474.0	[0..1]	[308..1]
GLSA_YERPN - Glutaminase OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=glsA PE=3 SV=1 gi\|149290657, gi... - gi\|149367043\|ref\|ZP_01889076.1\| putative glutaminase [Yersinia pestis CA88-4125], gi\|149290657\|gb\|ED... gi\|145597872, gi... - gi\|145597872\|ref\|YP_001161948.1\| glutaminase [Yersinia pestis Pestoides F], gi\|145209568\|gb\|ABP38975... gi\|89102074, gi\|... - gi\|89102074\|ref\|ZP_01174739.1\| COG2066: Glutaminase [Yersinia pestis biovar Orientalis str. IP275], ... gi\|108806312, gi... - gi\|108806312\|ref\|YP_650228.1\| glutaminase [Yersinia pestis Antiqua], gi\|108778225\|gb\|ABG12283.1\| L-g... gi\|165923158, gi... - gi\|165924958\|ref\|ZP_02220790.1\| glutaminase [Yersinia pestis biovar Orientalis str. F1991016], gi\|16... gi\|162353396, gi... - gi\|77633210\|ref\|ZP_00795354.1\| COG2066: Glutaminase [Yersinia pestis Angola], gi\|162420581\|ref\|YP_00... gi\|45438099, gi\|... - gi\|45443231\|ref\|NP_994770.1\| glutaminase [Yersinia pestis biovar Microtus str. 91001], gi\|45438099\|g... gi\|22127212, gi\|... - gi\|22127212\|ref\|NP_670635.1\| glutaminase [Yersinia pestis KIM], gi\|21960280\|gb\|AAM86886.1\|AE013935_3... gi\|229837645, gi... - gi\|229837645\|ref\|ZP_04457807.1\| putative glutaminase [Yersinia pestis Pestoides A], gi\|229704333\|gb\|... gi\|218928120, gi... - gi\|218928120\|ref\|YP_002345995.1\| glutaminase [Yersinia pestis CO92], gi\|16121252\|ref\|NP_404565.1\| gl... gi\|229697235, gi... - gi\|229840869\|ref\|ZP_04461028.1\| putative glutaminase [Yersinia pestis biovar Orientalis str. PEXU2],... gi\|229690880, gi... - gi\|229842570\|ref\|ZP_04462725.1\| putative glutaminase [Yersinia pestis biovar Orientalis str. India 1... gi\|165990877, gi... - gi\|166010391\|ref\|ZP_02231289.1\| glutaminase [Yersinia pestis biovar Antiqua str. E1979001], gi\|16599... gi\|166212862, gi... - gi\|166212862\|ref\|ZP_02238897.1\| glutaminase [Yersinia pestis biovar Antiqua str. B42003004], gi\|1662... gi\|167399886, gi... - gi\|167399886\|ref\|ZP_02305404.1\| glutaminase [Yersinia pestis biovar Antiqua str. UG05-0454], gi\|1670... gi\|167422002, gi... - gi\|167422002\|ref\|ZP_02313755.1\| glutaminase [Yersinia pestis biovar Orientalis str. MG05-1020], gi\|1... gi\|167426699, gi... - gi\|167426699\|ref\|ZP_02318452.1\| glutaminase [Yersinia pestis biovar Mediaevalis str. K1973002], gi\|1... GLSA1_YERPE - Glutaminase 1 OS=Yersinia pestis GN=glsA1 PE=3 SV=1	474.0	[0..1]	[308..1]
gi\|117672578, gi... - gi\|77630197\|ref\|ZP_00792783.1\| COG2066: Glutaminase [Yersinia pseudotuberculosis IP 31758], gi\|15395...	474.0	[0..1]	[308..1]
gi\|91228694, gi\|... - gi\|91228694\|ref\|ZP_01262608.1\| glutaminase [Vibrio alginolyticus 12G01], gi\|91187765\|gb\|EAS74083.1\| ...	472.0	[0..1]	[308..1]
gi\|254230232, gi... - gi\|254230232\|ref\|ZP_04923624.1\| glutaminase superfamily [Vibrio sp. Ex25], gi\|194538709\|ref\|YP_00207...	471.0	[0..1]	[308..1]
GLSA_VIBF1 - Glutaminase OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=glsA PE=3 SV=1	470.0	[0..1]	[308..1]
gi\|238798796, gi... - gi\|77961507\|ref\|ZP_00825343.1\| COG2066: Glutaminase [Yersinia mollaretii ATCC 43969], gi\|238798796\|r...	469.0	[0..2]	[308..9]
gi\|77976488 - gi\|77976488\|ref\|ZP_00831974.1\| COG2066: Glutaminase [Yersinia intermedia ATCC 29909]	467.0	[0..9]	[308..1]
gi\|238712854, gi... - gi\|77956388\|ref\|ZP_00820491.1\| COG2066: Glutaminase [Yersinia bercovieri ATCC 43970], gi\|238786239\|r...	467.0	[0..2]	[308..9]
GLSA_VIBVU - Glutaminase OS=Vibrio vulnificus (strain CMCP6) GN=glsA PE=3 SV=1 GLSA_VIBVU - Glutaminase OS=Vibrio vulnificus GN=glsA PE=3 SV=1 GLSA_VIBVY - Glutaminase OS=Vibrio vulnificus (strain YJ016) GN=glsA PE=3 SV=2	467.0	[0..1]	[308..1]

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Predicted Domain #1

Region A:
Residues: [1-308]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAVAMDNAIL ENILRQVRPL IGQGKVADYI PALATVDGSR LGIAICTVDG QLFQAGDAQE  60
   61 RFSIQSISKV LSLVVAMRHY SEEEIWQRVG KDPSGSPFNS LVQLEMEQGI PRNPFINAGA 120
  121 LVVCDMLQGR LSAPRQRMLE VVRGLSGVSD ISYDTVVARS EFEHSARNAA IAWLMKSFGN 180
  181 FHHDVTTVLQ NYFHYCALKM SCVELARTFV FLANQGKAIH IDEPVVTPMQ ARQINALMAT 240
  241 SGMYQNAGEF AWRVGLPAKS GVGGGIVAIV PHEMAIAVWS PELDDAGNSL AGIAVLEQLT 300
  301 KQLGRSVY

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	117.0
Match:	2pbyA
Description:	No description for 2pbyA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits