| Protein: | HBB1_RAT |
| Organism: | Rattus norvegicus |
| Length: | 147 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for HBB1_RAT.
| Description | E-value | Query Range |
Subject Range |
|
|
193.0 | [0..1] | [147..45] |
|
|
192.0 | [0..1] | [147..1] |
|
|
192.0 | [0..1] | [147..1] |
|
|
191.0 | [0..1] | [147..6] |
|
|
191.0 | [0..1] | [147..1] |
|
|
190.0 | [0..1] | [147..1] |
|
Region A: Residues: [1-147] |
1 11 21 31 41 51
| | | | | |
1 MVHLTDAEKA AVNGLWGKVN PDDVGGEALG RLLVVYPWTQ RYFDSFGDLS SASAIMGNPK 60
61 VKAHGKKVIN AFNDGLKHLD NLKGTFAHLS ELHCDKLHVD PENFRLLGNM IVIVLGHHLG 120
121 KEFTPCAQAA FQKVVAGVAS ALAHKYH
|
| Detection Method: |  |
| Confidence: | 48.0 |
| Match: | 1fdhG |
| Description: | Hemoglobin, beta-chain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| oxygen transporter activity | 12.7518923261978 | bayes_pls_golite062009 |
| hemoglobin binding | 7.80994828423656 | bayes_pls_golite062009 |
| oxygen binding | 7.60582561525971 | bayes_pls_golite062009 |
| hemoglobin alpha binding | 6.6133698394882 | bayes_pls_golite062009 |
| organic acid binding | 4.76461807092667 | bayes_pls_golite062009 |
| hemoglobin beta binding | 3.70103281638942 | bayes_pls_golite062009 |
| transporter activity | 2.30531874940611 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 2.13533596372692 | bayes_pls_golite062009 |
| binding | 1.61998555357457 | bayes_pls_golite062009 |
| protein binding | 1.50013290504406 | bayes_pls_golite062009 |
| oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | 0.436801914510671 | bayes_pls_golite062009 |
