| Protein: | gi|123996257, gi... |
| Organism: | synthetic construct |
| Length: | 677 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|123996257, gi....
| Description | E-value | Query Range |
Subject Range |
|
|
651.0 | [0..1] | [519..1] |
|
|
648.0 | [0..1] | [677..1] |
|
|
647.0 | [0..1] | [676..1] |
|
|
644.0 | [0..1] | [677..1] |
|
|
641.0 | [0..1] | [677..1] |
|
Region A: Residues: [1-155] |
1 11 21 31 41 51
| | | | | |
1 MAEEKKLKLS NTVLPSESMK VVAESMGIAQ IQEETCQLLT DEVSYRIKEI AQDALKFMHM 60
61 GKRQKLTTSD IDYALKLKNV EPLYGFHAQE FIPFRFASGG GRELYFYEEK EVDLSDIINT 120
121 PLPRVPLDVC LKAHWLSIEG CQPAIPENPP PAPKE
|
| Detection Method: |  |
| Confidence: | 23.522879 |
| Match: | 1tafB |
| Description: | TAF(II)62 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [156-291] |
1 11 21 31 41 51
| | | | | |
1 QQKAEATEPL KSAKPGQEED GPLKGKGQGA TTADGKGKEK KAPPLLEGAP LRLKPRSIHE 60
61 LSVEQQLYYK EITEACVGSC EAKRAEALQS IATDPGLYQM LPRFSTFISE GVRVNVVQNN 120
121 LALLIYLMRM VKALMD
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [292-441] |
1 11 21 31 41 51
| | | | | |
1 NPTLYLEKYV HELIPAVMTC IVSRQLCLRP DVDNHWALRD FAARLVAQIC KHFSTTTNNI 60
61 QSRITKTFTK SWVDEKTPWT TRYGSIAGLA ELGHDVIKTL ILPRLQQEGE RIRSVLDGPV 120
121 LSNIDRIGAD HVQSLLLKHC APVLAKLRPP
|
| Detection Method: | |
| Confidence: | 58.823909 |
| Match: | PF07571.1 |
| Description: | No description for PF07571.1 was found. |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [442-677] |
1 11 21 31 41 51
| | | | | |
1 PDNQDAYRAE FGSLGPLLCS QVVKARAQAA LQAQQVNRTT LTITQPRPTL TLSQAPQPGP 60
61 RTPGLLKVPG SIALPVQTLV SARAAAPPQP SPPPTKFIVM SSSSSAPSTQ QVLSLSTSAP 120
121 GSGSTTTSPV TTTVPSVQPI VKLVSTATTA PPSTAPSGPG SVQKYIVVSL PPTGEGKGGP 180
181 TSHPSPVPPP ASSPSPLSGS ALCGGKQEAG DSPPPAPGTP KANGSQPNSG SPQPAP
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
