YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|127766826, gi...
Organism:	Listeria monocytogenes J2818
Length:	308 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|127766826, gi....

Description	E-value	Query Range	Subject Range
gi\|73663552, gi\|... - gi\|73663552\|ref\|YP_302333.1\| cysteine synthase [Staphylococcus saprophyticus subsp. saprophyticus AT...	351.0	[0..5]	[308..7]
gi\|70727496, gi\|... - gi\|70727496\|ref\|YP_254412.1\| cysteine synthase [Staphylococcus haemolyticus JCSC1435], gi\|68448222\|d... gi\|228476212, gi... - gi\|228476212\|ref\|ZP_04060915.1\| cysteine synthase A [Staphylococcus hominis SK119], gi\|228269697\|gb\|...	351.0	[0..5]	[308..7]
gi\|251806688, gi... - gi\|251809820\|ref\|ZP_04824293.1\| cysteine synthase [Staphylococcus epidermidis BCM-HMP0060], gi\|25180... gi\|242241598, gi... - gi\|242241598\|ref\|ZP_04796043.1\| cysteine synthase [Staphylococcus epidermidis W23144], gi\|242234979\|... CYSK_STAEQ - Cysteine synthase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=cysK PE=3 SV=1 CYSK_STAEP - (Q8CMT6) Cysteine synthase (EC 2.5.1.47) (O-acetylserine sulfhydrylase) (O-acetylserine (Thiol)-lyas... CYSK_STAES - Cysteine synthase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=cysK PE=3 SV=1	349.0	[0..7]	[307..9]
gi\|227247508, gi... - gi\|227556072\|ref\|ZP_03986119.1\| cysteine synthase (o-acetylserine sulfhydrylase) family protein [Sta... gi\|269202133\|ref... - cysteine synthase [Staphylococcus aureus subsp. aureus ED98] gi\|253315218 - gi\|253315218\|ref\|ZP_04838431.1\| cysteine synthase A [Staphylococcus aureus subsp. aureus str. CF-Mar... gi\|253730981, gi... - gi\|253730981\|ref\|ZP_04865146.1\| cysteine synthase (o-acetylserine sulfhydrylase) family protein [Sta... gi\|227900600, gi... - gi\|227900600\|ref\|ZP_04018405.1\| cysteine synthase (o-acetylserine sulfhydrylase) family protein [Sta... gi\|251804219, gi... - gi\|251812231\|ref\|ZP_04826704.1\| cysteine synthase (o-acetylserine sulfhydrylase) family protein [Sta... gi\|25291764 - pir\|\|B89818 cysteine synthase (EC 4.2.99.8) [similarity] - Staphylococcus aureus (strain N315) gi\|151220687, gi... - gi\|151220687\|ref\|YP_001331509.1\| cysteine synthase-like protein [Staphylococcus aureus subsp. aureus... CYSK_STAAR - Cysteine synthase OS=Staphylococcus aureus (strain MRSA252) GN=cysK PE=3 SV=1 gi\|87201831, gi\|... - gi\|88194273\|ref\|YP_499065.1\| hypothetical protein SAOUHSC_00488 [Staphylococcus aureus subsp. aureus... gi\|253735248, gi... - gi\|253735248\|ref\|ZP_04869413.1\| cysteine synthase (o-acetylserine sulfhydrylase) family protein [Sta... CYSK_STAAW - Cysteine synthase OS=Staphylococcus aureus (strain MW2) GN=cysK PE=3 SV=1 gi\|87126032, gi\|... - gi\|87160058\|ref\|YP_493200.1\| cysteine synthase A [Staphylococcus aureus subsp. aureus USA300_FPR3757... gi\|255005306 - gi\|255005306\|ref\|ZP_05143907.2\| cysteine synthase A [Staphylococcus aureus subsp. aureus Mu50-omega] CYSK_STAAN - Cysteine synthase OS=Staphylococcus aureus (strain N315) GN=cysK PE=1 SV=1 CYSK_STAAM - Cysteine synthase OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=cysK PE=3 SV=1 CYSK_STAAC - Cysteine synthase OS=Staphylococcus aureus (strain COL) GN=cysK PE=3 SV=1 CYSK_STAAS - Cysteine synthase OS=Staphylococcus aureus (strain MSSA476) GN=cysK PE=3 SV=1 gi\|156978841, gi... - gi\|156978841\|ref\|YP_001441100.1\| cysteine synthase #o-acetylserine sulfhydrylase homologue [Staphylo... gi\|161508753, gi... - gi\|161508753\|ref\|YP_001574412.1\| cysteine synthase [Staphylococcus aureus subsp. aureus USA300_TCH15... gi\|221142295 - gi\|221142295\|ref\|ZP_03566788.1\| cysteine synthase [Staphylococcus aureus subsp. aureus str. JKD6009] gi\|87126032\|gb\|A... - cysteine synthase A [Staphylococcus aureus subsp. aureus USA300], cysteine synthase A [Staphylococcu... gi\|221138562 - gi\|221138562\|ref\|ZP_03563364.1\| cysteine synthase [Staphylococcus aureus subsp. aureus str. JKD6008]	347.0	[0..5]	[308..7]
gi\|147740041, gi... - gi\|90586966\|ref\|ZP_01242649.1\| Cysteine synthase K/M:Cysteine synthase A [Staphylococcus aureus subs... gi\|150393018, gi... - gi\|90584028\|ref\|ZP_01239774.1\| Cysteine synthase K/M:Cysteine synthase A [Staphylococcus aureus subs...	346.0	[0..5]	[308..7]
gi\|82655751, gi\|... - gi\|82750220\|ref\|YP_415961.1\| cysteine synthase [Staphylococcus aureus RF122], gi\|82655751\|emb\|CAI801...	345.0	[0..5]	[308..7]
gi\|166854037, gi... - gi\|167039797\|ref\|YP_001662782.1\| cysteine synthase A [Thermoanaerobacter sp. X514], gi\|166854037\|gb\|...	336.0	[0..3]	[300..8]
gi\|20517485, gi\|... - gi\|20808833\|ref\|NP_624004.1\| cysteine synthase [Thermoanaerobacter tengcongensis MB4], gi\|20517485\|g... gi\|20808833 - gi\|20808833\|ref\|NP_624004.1\| Cysteine synthase [Thermoanaerobacter tengcongensis MB4]	335.0	[0..2]	[300..7]
gi\|254854453 - gi\|254854453\|ref\|ZP_05243801.1\| cysteine synthase [Listeria monocytogenes FSL R2-503] gi\|254825863 - gi\|254825863\|ref\|ZP_05230864.1\| cysteine synthase [Listeria monocytogenes FSL J1-194] gi\|254992588 - gi\|254992588\|ref\|ZP_05274778.1\| cysteine synthase [Listeria monocytogenes FSL J2-064] gi\|254880535 - gi\|254880535\|ref\|ZP_05253245.1\| cysteine synthase [Listeria monocytogenes FSL J2-071] gi\|46879719, gi\|... - gi\|46906455\|ref\|YP_012844.1\| cysteine synthase A [Listeria monocytogenes str. 4b F2365], gi\|46879719... gi\|133728504, gi... - gi\|254873768\|ref\|ZP_05246478.1\| cysteine synthase [Listeria monocytogenes FSL N1-017], gi\|153165185\|... gi\|47093165, gi\|... - gi\|47093165\|ref\|ZP_00230940.1\| cysteine synthase A [Listeria monocytogenes str. 4b H7858], gi\|470184... gi\|255522229 - gi\|255522229\|ref\|ZP_05389466.1\| cysteine synthase [Listeria monocytogenes FSL J1-175] gi\|153200658, gi... - gi\|254933063\|ref\|ZP_05266422.1\| cysteine synthase [Listeria monocytogenes HPB2262], gi\|153200658\|ref... gi\|225875314, gi... - gi\|226222852\|ref\|YP_002756959.1\| cysteine synthase [Listeria monocytogenes Clip81459], gi\|225875314\|...	335.0	[0..1]	[308..1]
gi\|16799332 - gi\|16799332\|ref\|NP_469600.1\| hypothetical protein lin0255 [Listeria innocua Clip11262] gi\|16412684, gi\|... - pir\|\|AH1464 cysteine synthase (EC 4.2.99.8) [similarity] - Listeria innocua (strain Clip11262), gi\|1...	333.0	[0..1]	[308..1]

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Predicted Domain #1

Region A:
Residues: [1-308]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTIANSITDL IGKTPIVKLN RLPEAGSADV YVKLEFQNPG GSVKDRIANA MIESAEKSGA  60
   61 LKPGDTIIEP TSGNTGIGLA MVAAAKGYQA IFVMPETMSL ERRKLLQAYG AKLVLTPGPD 120
  121 GMKGAIAKAE ELAKENNYFV PQQFHNPANP AVHEETTGPE IVEAFGKDGL DAFIAGVGTG 180
  181 GTVTGVGHVL KKNYPDVKIY ALEPEESPVL SGGSPSPHKI QGIGAGFVPD TLDTKVYDGI 240
  241 LKVSSEDALE TAREVAKKEG ILVGISSGAT IKAALDLAKE LGAGKKVLAI VASNGERYLS 300
  301 TPLYNFED

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	82.69897
Match:	2eguA
Description:	No description for 2eguA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits