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View Structure Prediction Details

Protein: MSRA_MOUSE
Organism: Mus musculus
Length: 233 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MSRA_MOUSE.

Description E-value Query
Range
Subject
Range
gi|12832275 - gi|12832275|dbj|BAB22035.1| unnamed protein product [Mus musculus]
411.0 [0..1] [233..1]
MSRA_RAT - Mitochondrial peptide methionine sulfoxide reductase OS=Rattus norvegicus GN=Msra PE=1 SV=1
408.0 [0..1] [233..1]
gi|59858453 - gi|59858453|gb|AAX09061.1| methionine sulfoxide reductase A [Bos taurus]
402.0 [0..1] [233..1]
MSRA - methionine sulfoxide reductase A
399.0 [0..1] [233..1]
gi|84579081 - gi|84579081|dbj|BAE72974.1| hypothetical protein [Macaca fascicularis]
399.0 [0..1] [233..1]
gi|114623478 - gi|114623478|ref|XP_001138036.1| PREDICTED: methionine sulfoxide reductase A isoform 4 [Pan troglody...
398.0 [0..1] [233..1]
gi|109085621 - gi|109085621|ref|XP_001089893.1| PREDICTED: methionine sulfoxide reductase A isoform 3 [Macaca mulat...
393.0 [0..1] [230..1]

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Predicted Domain #1
Region A:
Residues: [1-233]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLSASRRALQ LLSSANPVRR MGDSASKVIS AEEALPGRTE PIPVTAKHHV SGNRTVEPFP  60
   61 EGTQMAVFGM GCFWGAERKF WVLKGVYSTQ VGFAGGHTRN PTYKEVCSEK TGHAEVVRVV 120
  121 YRPEHISFEE LLKVFWENHD PTQGMRQGND FGTQYRSAVY PTSAVQMEAA LRSKEEYQKV 180
  181 LSKHNFGPIT TDIREGQVFY YAEDYHQQYL SKNPDGYCGL GGTGVSCPMA IKK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 104.0
Match: 1fvaA
Description: Peptide methionine sulfoxide reductase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
oxidoreductase activity, acting on sulfur group of donors, disulfide as acceptor 7.33214277590189 bayes_pls_golite062009
peptide-methionine-(S)-S-oxide reductase activity 7.05871760837663 bayes_pls_golite062009
oxidoreductase activity, acting on sulfur group of donors 4.45221508174489 bayes_pls_golite062009
catalytic activity 2.02168745464921 bayes_pls_golite062009
binding 1.21670366786992 bayes_pls_golite062009
oxidoreductase activity 1.10659465297393 bayes_pls_golite062009
protein binding 0.370301035521826 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle