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View Structure Prediction Details

Protein: ATP5L_MOUSE
Organism: Mus musculus
Length: 103 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ATP5L_MOUSE.

Description E-value Query
Range
Subject
Range
gi|12842190, gi|... - gi|12842190|dbj|BAB25507.1| unnamed protein product [Mus musculus], gi|12841973|dbj|BAB25423.1| unna...
196.0 [0..1] [103..1]
gi|47058994, gi|... - gi|47058994|ref|NP_997681.1| ATP synthase, H+ transporting, mitochondrial F0 complex, subunit G [Rat...
185.0 [0..1] [103..1]
gi|74354012 - gi|74354012|gb|AAI02456.1| ATP synthase, H+ transporting, mitochondrial F0 complex, subunit G [Bos t...
184.0 [0..1] [103..1]
ATP5L_PONAB - ATP synthase subunit g, mitochondrial OS=Pongo abelii GN=ATP5L PE=3 SV=1
ATP5L_PONPY - ATP synthase subunit g, mitochondrial - Pongo pygmaeus (Orangutan)
181.0 [0..1] [103..1]

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Predicted Domain #1
Region A:
Residues: [1-103]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKFIRNFAE KAPSMVAAAV TYSKPRLATF WHYAKVELVP PTPAEIPTAI QSVKKIIQSA  60
   61 KTGSFKHLTV KEAVLNGLVA TEVWMWFYIG EIIGKRGIVG YDV

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 46.537602
Match: PF04718.6
Description: No description for PF04718.6 was found.

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.978 N/A N/A a.7.2 Enzyme IIa from lactose specific PTS, IIa-lac
View Download 0.975 N/A N/A a.7.2 Enzyme IIa from lactose specific PTS, IIa-lac
View Download 0.900 N/A N/A f.36.1 Neurotransmitter-gated ion-channel pransmembrane pore
View Download 0.895 N/A N/A f.36.1 Neurotransmitter-gated ion-channel pransmembrane pore
View Download 0.892 N/A N/A f.36.1 Neurotransmitter-gated ion-channel pransmembrane pore
View Download 0.874 N/A N/A a.7.1 Spectrin repeat
View Download 0.809 N/A N/A a.7.1 Spectrin repeat
View Download 0.760 N/A N/A a.23.1 HSC20 (HSCB), C-terminal oligomerisation domain
View Download 0.753 N/A N/A a.23.1 HSC20 (HSCB), C-terminal oligomerisation domain
View Download 0.672 N/A N/A a.23.1 HSC20 (HSCB), C-terminal oligomerisation domain


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle