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View Structure Prediction Details

Protein: gi|31543490, gi|...
Organism: Mus musculus
Length: 92 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|31543490, gi|....

Description E-value Query
Range
Subject
Range
gi|19548167, gi|... - gi|19548167|gb|AAL90456.1|AF413572_1 protein kinase inhibitor beta-109 [Rattus norvegicus], gi|14903...
131.0 [0..3] [92..20]
IPKB_MOUSE - cAMP-dependent protein kinase inhibitor beta OS=Mus musculus GN=Pkib PE=3 SV=1
130.0 [0..1] [92..1]
gi|55959913 - gi|55959913|emb|CAI17094.1| protein kinase (cAMP-dependent, catalytic) inhibitor beta [Homo sapiens]
gi|208968697 - gi|208968697|dbj|BAG74187.1| protein kinase (cAMP-dependent, catalytic) inhibitor beta [synthetic co...
109.0 [0..12] [92..7]

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Predicted Domain #1
Region A:
Residues: [1-92]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGGGSSPEAQ QDSVMRTDSS EMTDVESVIT SFASSARAGR RNALPDIQSS LATSGSSDLP  60
   61 LKLEALAVKE DAKTKNEEKD QGQPKTPLNE GK

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 41.920819
Match: PF02827.7
Description: No description for PF02827.7 was found.

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.745 N/A N/A a.118.1 ARM repeat
View Download 0.684 N/A N/A a.46.2 Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain
View Download 0.684 N/A N/A a.46.2 Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain
View Download 0.683 N/A N/A a.4.5 "Winged helix" DNA-binding domain
View Download 0.683 N/A N/A a.4.5 "Winged helix" DNA-binding domain
View Download 0.657 N/A N/A a.118.9 ENTH/VHS domain
View Download 0.634 N/A N/A a.247.1 Description not found.
View Download 0.617 N/A N/A a.2.3 Chaperone J-domain
View Download 0.548 N/A N/A a.7.6 Ribosomal protein S20
View Download 0.521 N/A N/A a.118.9 ENTH/VHS domain


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle