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View Structure Prediction Details

Protein: KV1A1_MOUSE
Organism: Mus musculus
Length: 114 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for KV1A1_MOUSE.

Description E-value Query
Range
Subject
Range
gi|46488461 - gi|46488461|gb|AAS99553.1| recombinant anti-CD64 immunotoxin [synthetic construct]
193.0 [0..1] [113..191]
gi|21669367 - gi|21669367|dbj|BAC01708.1| immunoglobulin kappa light chain VLJ region [Homo sapiens]
189.0 [0..1] [114..23]

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Predicted Domain #1
Region A:
Residues: [1-114]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DIVMTQSPTF LAVTASKKVT ISCTASESLY SSKHKVHYLA WYQKKPEQSP KLLIYGASNR  60
   61 YIGVPDRFTG SGSGTDFTLT ISSVQVEDLT HYYCAQFYSY PLTFGAGTKL ELKR

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 45.69897
Match: 1za6A
Description: The structure of an antitumor CH2-domain-deleted humanized antibody
Matching Structure (courtesy of the PDB):

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Created and Maintained by: Michael Riffle