YRC Public Data Repository - Protein Structure Prediction

Protein:	TI17B_MOUSE
Organism:	Mus musculus
Length:	172 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TI17B_MOUSE.

Description	E-value	Query Range	Subject Range
gi\|34933423, gi\|... - gi\|34933423\|ref\|XP_228758.2\| PREDICTED: similar to Mitochondrial import inner membrane translocase s...	245.0	[0..1]	[172..1]
gi\|74178221 - gi\|74178221\|dbj\|BAE29896.1\| unnamed protein product [Mus musculus]	244.0	[0..1]	[172..1]
gi\|109130740 - gi\|109130740\|ref\|XP_001104863.1\| PREDICTED: similar to Mitochondrial import inner membrane transloca...	243.0	[0..1]	[172..51]
gi\|57111755 - gi\|57111755\|ref\|XP_538028.1\| PREDICTED: similar to Mitochondrial import inner membrane translocase s...	243.0	[0..1]	[172..1]
TIMM17B - translocase of inner mitochondrial membrane 17 homolog B (yeast) gi\|55662945 - gi\|55662945\|ref\|XP_521050.1\| PREDICTED: similar to Mitochondrial import inner membrane translocase s...	240.0	[0..1]	[172..1]
gi\|76659462 - gi\|76659462\|ref\|XP_873411.1\| PREDICTED: similar to Mitochondrial import inner membrane translocase s...	236.0	[0..1]	[172..1]

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Predicted Domain #1

Region A:
Residues: [1-172]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEEYAREPCP WRIVDDCGGA FTMGVIGGGV FQAIKGFRNA PVGIRHRFRG SVNAVRIRAP  60
   61 QIGGSFAVWG GLFSTIDCGL VRLRGKEDPW NSISSGALTG AVLAARSGPL AMVGSAMMGG 120
  121 ILLALIEGVG ILLTRYTAQQ FRNAPPFLED PSQLTPKEGS PAPGYPNYQQ YH

[Run NCBI BLAST on this sequence.]

Detection Method:	Pfam
Confidence:	57.568636
Match:	PF02466.10
Description:	No description for PF02466.10 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

		MCM Score	GO Score	GO Term	SCOP Match	SCOP Description
View	Download	0.892	N/A	N/A	a.24.17	Group V grass pollen allergen

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits