YRC Public Data Repository - Protein Structure Prediction

Protein:	UCK1_MOUSE
Organism:	Mus musculus
Length:	277 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for UCK1_MOUSE.

Description	E-value	Query Range	Subject Range
gi\|62644938 - gi\|62644938\|ref\|XP_231143.3\| PREDICTED: similar to Uridine-cytidine kinase 1 (UCK 1) (Uridine monoph...	290.0	[0..1]	[277..1]
gi\|48146679 - gi\|48146679\|emb\|CAG33562.1\| UCK1 [Homo sapiens]	276.0	[0..1]	[277..1]
gi\|109109986 - gi\|109109986\|ref\|XP_001105895.1\| PREDICTED: similar to uridine-cytidine kinase 1 isoform 4 [Macaca m...	271.0	[0..1]	[277..1]
UCK1_BOVIN - Uridine-cytidine kinase 1 OS=Bos taurus GN=UCK1 PE=2 SV=1	270.0	[0..1]	[277..1]
gi\|471981 - gi\|471981\|gb\|AAB50568.1\| uridine kinase	269.0	[0..19]	[277..2]
UCK1A_XENLA - Uridine-cytidine kinase 1-A OS=Xenopus laevis GN=uck1-a PE=2 SV=1	256.0	[0..1]	[277..1]

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Predicted Domain #1

Region A:
Residues: [1-277]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASAGGGGSE SAAPEADRPQ PRPFLIGVSG GTASGKSTVC EKIMELLGQN EVDRRQRKLV  60
   61 ILSQDCFYKV LTAEQKAKAL KGQYNFDHPD AFDNDLMHKT LKNIVEGKTV EVPTYDFVTH 120
  121 SRLPETTVVY PADVVLFEGI LVFYTQEIRD MFHLRLFVDT DSDVRLSRRV LRDVQRGRDL 180
  181 EQILTQYTAF VKPAFEEFCL PTKKYADVII PRGVDNMVAI NLIVQHIQDI LNGDLCKRHR 240
  241 GGPNGRNHKR TFPEPGDHPG VLATGKRSHL ESSSRPH

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	59.0
Match:	2jeoA
Description:	No description for 2jeoA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits