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View Structure Prediction Details

Protein: gi|4092930, gi|6...
Organism: Mus musculus
Length: 115 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|4092930, gi|6....

Description E-value Query
Range		 Subject
Range
gi|119588900 - gi|119588900|gb|EAW68494.1| parathyroid hormone, isoform CRA_a [Homo sapiens]
gi|55635601 - gi|55635601|ref|XP_521846.1| PREDICTED: hypothetical protein isoform 2 [Pan troglodytes]
 207.0 [0..1] [115..33]
PTHY_FELCA - Parathyroid hormone OS=Felis catus GN=PTH PE=3 SV=1
 199.0 [0..1] [115..1]
PTHY_CANLF - Parathyroid hormone OS=Canis lupus familiaris GN=PTH PE=3 SV=1
 198.0 [0..1] [115..1]
CCDS7812.1_1 - null
gi|109107219 - gi|109107219|ref|XP_001094024.1| PREDICTED: parathyroid hormone [Macaca mulatta]
PTHY_MACFA - Parathyroid hormone OS=Macaca fascicularis GN=PTH PE=3 SV=1
 198.0 [0..1] [115..1]
gi|114636278 - gi|114636278|ref|XP_001171819.1| PREDICTED: hypothetical protein isoform 1 [Pan troglodytes]
gi|208968649 - gi|208968649|dbj|BAG74163.1| parathyroid hormone [synthetic construct]
PTH - parathyroid hormone
 198.0 [0..1] [115..1]
PTHY_BOVIN - Parathyroid hormone OS=Bos taurus GN=PTH PE=1 SV=1
 197.0 [0..1] [115..1]
gi|2144646 - pir||PTPG parathyroid hormone precursor - pig
PTHY_PIG - Parathyroid hormone OS=Sus scrofa GN=PTH PE=1 SV=1
 196.0 [0..1] [115..1]
PTHY_HORSE - Parathyroid hormone OS=Equus caballus GN=PTH PE=3 SV=1
 193.0 [0..1] [115..1]
PTHY_RAT - Parathyroid hormone OS=Rattus norvegicus GN=Pth PE=2 SV=1
 184.0 [0..1] [115..1]

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Predicted Domain #1
Region A:
Residues: [1-115] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMSANTVAKV MIIMLAVCLL TQTDGKPVRK RAVSEIQLMH NLGKHLASME RMQWLRRKLQ  60
   61 DMHNFVSLGV QMAARDGSHQ KPTKKEENVL VDGNPKSLGE GDKADVDVLV KSKSQ

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 64.309804
Match: PF01279.8
Description: No description for PF01279.8 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

    MCM
Score		 GO
Score		 GO
Term		 SCOP
Match		 SCOP Description
View Download 0.803 N/A N/A a.74.1 Cyclin-like

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle