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View Structure Prediction Details

Protein: SLUR1_MOUSE
Organism: Mus musculus
Length: 110 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SLUR1_MOUSE.

Description E-value Query
Range		 Subject
Range
gi|149066222, gi... - gi|27662046|ref|XP_216966.1| PREDICTED: similar to Ars component B [Rattus norvegicus], gi|194474086...
 187.0 [0..1] [110..1]
SLURP1 - secreted LY6/PLAUR domain containing 1
gi|114622052 - gi|114622052|ref|XP_001149955.1| PREDICTED: ARS component B [Pan troglodytes]
 149.0 [0..1] [101..1]
gi|109087658 - gi|109087658|ref|XP_001092510.1| PREDICTED: secreted LY6/PLAUR domain containing 1 [Macaca mulatta]
 145.0 [0..1] [101..1]
LYPD2_MOUSE - Ly6/PLAUR domain-containing protein 2 OS=Mus musculus GN=Lypd2 PE=2 SV=1
 141.0 [0..8] [100..5]
gi|73974818 - gi|73974818|ref|XP_851287.1| PREDICTED: similar to LY6/PLAUR domain containing 2 [Canis familiaris]
 129.0 [0..22] [106..111]
gi|76634100 - gi|76634100|ref|XP_876125.1| PREDICTED: similar to LY6/PLAUR domain containing 2 [Bos taurus]
 126.0 [0..23] [100..44]
gi|114622054 - gi|114622054|ref|XP_001150013.1| PREDICTED: LY6/PLAUR domain containing 2 [Pan troglodytes]
 125.0 [0..17] [100..17]

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Predicted Domain #1
Region A:
Residues: [1-110] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTLRWAMWLL LLAAWSMGYG EAFRCYTCEQ PTAINSCKNI AQCKMEDTAC KTVLETVEAA  60
   61 FPFNHSPMVT RSCSSSCLAT DPDGIGVAHP VFCCFRDLCN SGFPGFVAGL

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 2.02
Match: 2j8bA
Description: No description for 2j8bA was found.

Predicted functions:

Term Confidence Notes
receptor binding 2.2876727804187 bayes_pls_golite062009
binding 2.03683076036654 bayes_pls_golite062009
protein binding 1.91856813986737 bayes_pls_golite062009
glycosaminoglycan binding 0.958603108712839 bayes_pls_golite062009
polysaccharide binding 0.861259894883403 bayes_pls_golite062009
pattern binding 0.669234736478486 bayes_pls_golite062009
carbohydrate binding 0.337858077178818 bayes_pls_golite062009
growth factor binding 0.187447152740757 bayes_pls_golite062009
cytokine binding 0.187257177049352 bayes_pls_golite062009
YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle