YRC Public Data Repository - Protein Structure Prediction

Protein:	ANFC_MOUSE
Organism:	Mus musculus
Length:	126 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ANFC_MOUSE.

Description	E-value	Query Range	Subject Range
ANFC_ANGJA - C-type natriuretic peptide OS=Anguilla japonica GN=cnp PE=1 SV=2	113.0	[0..2]	[126..1]
ANFD_LITCT - C-type natriuretic peptide 2 OS=Lithobates catesbeiana PE=3 SV=1	110.0	[0..1]	[126..1]
ANFC_RAT - C-type natriuretic peptide OS=Rattus norvegicus GN=Nppc PE=2 SV=1	108.0	[0..19]	[126..19]
gi\|73994136 - gi\|73994136\|ref\|XP_852684.1\| PREDICTED: similar to natriuretic peptide precursor type C [Canis famil...	105.0	[0..19]	[126..19]
ANFC_PIG - C-type natriuretic peptide OS=Sus scrofa GN=NPPC PE=1 SV=2 gi\|108253 - pir\|\|A36155 natriuretic peptide C precursor - pig	105.0	[0..19]	[126..19]
ANFC_SHEEP - C-type natriuretic peptide OS=Ovis aries GN=NPPC PE=3 SV=1	104.0	[0..19]	[126..19]
gi\|114583940 - gi\|114583940\|ref\|XP_001141992.1\| PREDICTED: similar to C-type natriuretic peptide precursor [Pan tro...	103.0	[0..19]	[126..19]
gi\|109101546 - gi\|109101546\|ref\|XP_001108190.1\| PREDICTED: similar to natriuretic peptide precursor type C [Macaca ...	102.0	[0..19]	[126..159]
gi\|215254128, gi... - gi\|68383035\|ref\|XP_692388.1\| PREDICTED: similar to eel C-type natriuretic peptide [Danio rerio], gi\|...	102.0	[0..2]	[126..1]
gi\|12860569 - gi\|12860569\|dbj\|BAB31991.1\| unnamed protein product [Mus musculus]	102.0	[0..19]	[125..19]

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Predicted Domain #1

Region A:
Residues: [1-126]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHLSQLIACA LLLALLSLRP SEAKPGTPPK VPRTPPGEEL ADSQAAGGNQ KKGDKTPGSG  60
   61 GANLKGDRSR LLRDLRVDTK SRAAWARLLH EHPNARKYKG GNKKGLSKGC FGLKLDRIGS 120
  121 MSGLGC

[Run NCBI BLAST on this sequence.]

Detection Method:	Pfam
Confidence:	30.086186
Match:	PF00212.9
Description:	No description for PF00212.9 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits