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View Structure Prediction Details

Protein: DFA11_MOUSE
Organism: Mus musculus
Length: 85 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for DFA11_MOUSE.

Description E-value Query
Range
Subject
Range
DFA14_MOUSE - Alpha-defensin 14 (Fragment) OS=Mus musculus GN=Defa14 PE=2 SV=2
133.0 [0..1] [85..1]
gi|9247199 - gi|9247199|gb|AAB32271.2| cryptdin 17; Cryp17 [Mus sp.]
128.0 [0..4] [85..1]

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Predicted Domain #1
Region A:
Residues: [1-85]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ALVLLAFQVQ ADPIQNTDEE TKTEEQPGEE DQAVSVSFGD PEGTSLQEES LRDLVCYCRS  60
   61 RGCKGRERMN GTCRKGHLLY MLCCR

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Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.313 d.230.6 Description not found.
View Download 0.306 d.68.1 Translation initiation factor IF3, C-terminal domain
View Download 0.284 d.43.1 Elongation factor Ts (EF-Ts), dimerisation domain
View Download 0.276 b.36.1 PDZ domain-like
View Download 0.265 d.58.3 Protease propeptides/inhibitors
View Download 0.265 d.58.3 Protease propeptides/inhibitors
View Download 0.252 d.70.1 Yest killer toxins
View Download 0.219 b.1.14 Invasin/intimin cell-adhesion fragments
View Download 0.206 b.1.1 Immunoglobulin


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