YRC Public Data Repository - Protein Structure Prediction

Protein:	IPP2_MOUSE
Organism:	Mus musculus
Length:	206 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for IPP2_MOUSE.

Description	E-value	Query Range	Subject Range
gi\|63701773, gi\|... - gi\|63701773\|ref\|XP_484582.2\| PREDICTED: hypothetical protein [Mus musculus], gi\|149268296\|ref\|XP_001...	332.0	[0..1]	[206..110]
gi\|74002974 - gi\|74002974\|ref\|XP_535781.2\| PREDICTED: similar to protein phosphatase 1, regulatory (inhibitor) sub...	296.0	[0..1]	[206..139]
IPP2_RAT - Protein phosphatase inhibitor 2 OS=Rattus norvegicus GN=Ppp1r2 PE=1 SV=2 gi\|1050975 - gi\|1050975\|gb\|AAB35244.1\| phosphatase inhibitor-2; I-2 [Rattus sp.]	296.0	[0..1]	[206..1]
gi\|114591204 - gi\|114591204\|ref\|XP_516963.2\| PREDICTED: protein phosphatase 1, regulatory (inhibitor) subunit 2 iso...	288.0	[0..1]	[206..1]
PPP1R2 - protein phosphatase 1, regulatory (inhibitor) subunit 2	288.0	[0..1]	[206..1]
gi\|109053998 - gi\|109053998\|ref\|XP_001097826.1\| PREDICTED: similar to protein phosphatase 1, regulatory (inhibitor)...	287.0	[0..1]	[206..1]

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Predicted Domain #1

Region A:
Residues: [1-206]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAASTASHRP IKGILKNKTS AASPPVVPSA EQPRPIVEEE LSKKSQKWDE MNILATYHPA  60
   61 DKDYGLMKID EPNTPYHNMI GDDEDAYSDS EGNEVMTPDI LAKKLAAAEG SEPKYRTREQ 120
  121 ESSGEEDNDL SPEEREKKRQ FEMKRKLHYN EGLNIKLARQ LISKDLHDDD EDEEMAETAD 180
  181 GDSMNVEESS QGSTTSDHLQ HKSQSS

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	84.522879
Match:	2o8aI
Description:	No description for 2o8aI was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits