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View Structure Prediction Details

Protein: gi|12837962, gi|...
Organism: Mus musculus
Length: 216 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|12837962, gi|....

Description E-value Query
Range
Subject
Range
gi|12848162 - gi|12848162|dbj|BAB27852.1| unnamed protein product [Mus musculus]
361.0 [0..1] [216..1]
gi|37654272, gi|... - gi|37654272|gb|AAQ96241.1| LRRGT00028 [Rattus norvegicus], gi|114145630|ref|NP_001041419.1| hypothet...
350.0 [0..1] [216..5]
C7orf36 - chromosome 7 open reading frame 36
318.0 [0..1] [216..1]

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Predicted Domain #1
Region A:
Residues: [1-94]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSWFRAAPEN ASPGDQDVFD EEADESLLAQ REWQGHMRKR VQEGYRDGLD AGKALTLQRG  60
   61 FNQGYKEGAD VIINYGLLRG TLSALLSWCH LHGN

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [95-216]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SSTLISKISN LLDTVDQCEE CVLRRLKSVT SQPRVTDLLD AIEDMDLCHV VPSDQAKGDS  60
   61 NAEINTDSDS PNGMGCSHPE HCRPKEHAHL EKPSLSWILE QTSSLVKQLG VPADILQHLR 120
  121 QL

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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