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View Structure Prediction Details

Protein: gi|21410437, gi|...
Organism: Mus musculus
Length: 256 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|21410437, gi|....

Description E-value Query
Range
Subject
Range
CL043_MOUSE - Uncharacterized protein C12orf43 homolog OS=Mus musculus PE=2 SV=1
374.0 [0..1] [256..1]
gi|114647386 - gi|114647386|ref|XP_001163318.1| PREDICTED: similar to Chromosome 12 open reading frame 43 isoform 2...
317.0 [0..1] [256..1]
ENSPTRT00000010187 - null
C12orf43 - chromosome 12 open reading frame 43
311.0 [0..1] [256..1]
CL043_RAT - Uncharacterized protein C12orf43 homolog OS=Rattus norvegicus PE=1 SV=1
310.0 [0..1] [256..1]
gi|61555490, gi|... - gi|61555490|gb|AAX46722.1| hypothetical protein FLJ12448 [Bos taurus], gi|120419476|gb|ABM21557.1| h...
255.0 [0..8] [256..1]

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Predicted Domain #1
Region A:
Residues: [1-256]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVAPSGAMSD SENSSSSSSD AEELARCREA ATPAWGLEQR PGAAERPEAG AADKQAPTPQ  60
   61 PSRRHEVNQH EEDGNDLRTT PEFRAHVAKK LGALLDSSIA IAEVWKKSQK AKMQQVAKEE 120
  121 DGFRLFFTSI PGGHKKEASP RPCRKRQPPS SSEDSDEELQ RCREAAVSAS DILQESAIHC 180
  181 PAKAEEKKKL KKKAKKKVDN ADLAAAPGLE QVKEAGVVNG DPVSLGIQKK KKKKAKKSRE 240
  241 APLCPPAECA AAKPEN

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
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Found no confident structure predictions for this domain.


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Created and Maintained by: Michael Riffle