YRC Public Data Repository - Protein Structure Prediction

Protein:	IPKB_MOUSE
Organism:	Mus musculus
Length:	92 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for IPKB_MOUSE.

Description	E-value	Query Range	Subject Range
gi\|19548167, gi\|... - gi\|19548167\|gb\|AAL90456.1\|AF413572_1 protein kinase inhibitor beta-109 [Rattus norvegicus], gi\|14903...	111.0	[0..3]	[92..20]
gi\|31543490, gi\|... - ref\|NP_032889.2\| cAMP-dependent protein kinase inhibitor beta [Mus musculus], gi\|26350819\|dbj\|BAC39...	109.0	[0..1]	[92..1]
gi\|55959913 - gi\|55959913\|emb\|CAI17094.1\| protein kinase (cAMP-dependent, catalytic) inhibitor beta [Homo sapiens] gi\|208968697 - gi\|208968697\|dbj\|BAG74187.1\| protein kinase (cAMP-dependent, catalytic) inhibitor beta [synthetic co...	97.0	[0..12]	[92..7]
gi\|194670060, gi... - gi\|194670066\|ref\|XP_001788535.1\| PREDICTED: similar to protein kinase (cAMP-dependent, catalytic) in...	93.0	[0..15]	[92..1]

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Predicted Domain #1

Region A:
Residues: [1-92]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGGGTSPEAQ QDSVMRTDSS EMTDVESVIT SFASSARAGR RNALPDIQSS LATSGSSDLP  60
   61 LKLEALAVKE DAKTKNEEKD QGQPKTPLNE GK

[Run NCBI BLAST on this sequence.]

Detection Method:	Pfam
Confidence:	41.920819
Match:	PF02827.7
Description:	No description for PF02827.7 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits