YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: MARE1_MOUSE
Organism: Mus musculus
Length: 268 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MARE1_MOUSE.

Description E-value Query
Range		 Subject
Range
gi|114681760 - gi|114681760|ref|XP_001154462.1| PREDICTED: similar to EB1 [Pan troglodytes]
 459.0 [0..1] [257..57]
gi|73945697 - gi|73945697|ref|XP_851025.1| PREDICTED: similar to Microtubule-associated protein RP/EB family membe...
 458.0 [0..1] [257..92]
MARE1_RAT - Microtubule-associated protein RP/EB family member 1 OS=Rattus norvegicus GN=Mapre1 PE=1 SV=3
 457.0 [0..1] [257..1]
gi|30851559 - gi|30851559|gb|AAH52405.1| Mapre1 protein [Mus musculus]
 457.0 [0..1] [257..4]
ENSCJAT00000030381 - null
MARE1_PONAB - Microtubule-associated protein RP/EB family member 1 OS=Pongo abelii GN=MAPRE1 PE=2 SV=3
MARE1_PONPY - Microtubule-associated protein RP/EB family member 1 - Pongo pygmaeus (Orangutan)
 454.0 [0..1] [257..1]
gi|81174752, gi|... - gi|81174752|gb|ABB58918.1| microtubule-associated protein RP/EB family member 1 [Sus scrofa], gi|113...
 454.0 [0..1] [257..1]
MAPRE1 - microtubule-associated protein, RP/EB family, member 1
gi|190692025, gi... - gi|254071341|gb|ACT64430.1| microtubule-associated protein, RP/EB family, member 1 protein [syntheti...
 453.0 [0..1] [257..1]
MARE1_BOVIN - Microtubule-associated protein RP/EB family member 1 OS=Bos taurus GN=MAPRE1 PE=2 SV=3
 452.0 [0..1] [257..1]
gi|62901938 - gi|62901938|gb|AAY18920.1| microtubule-associated protein [synthetic construct]
 450.0 [0..2] [257..26]
gi|109092371, gi... - gi|109092375|ref|XP_001106799.1| PREDICTED: microtubule-associated protein, RP/EB family, member 1 i...
 448.0 [0..1] [257..1]

Back

Predicted Domain #1
Region A:
Residues: [1-182] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAVNVYSTSV TSDNLSRHDM LAWINESLQL NLTKIEQLCS GAAYCQFMDM LFPGSIALKK  60
   61 VKFQAKLEHE YIQNFKILQA GFKRMGVDKI IPVDKLVKGK FQDNFEFVQW FKKFFDANYD 120
  121 GKEYDPVAAR QGQETAVAPS LVAPALSKPK KPLGSSTAAP QRPIATQRTT AAPKAGPGMV 180
  181 RK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 78.0
Match: 1wyoA
Description: Solution structure of the CH domain of human microtubule-associated protein RP/EB family member 3
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [183-268] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NPGVGNGDDE AAELMQQVKV LKLTVEDLEK ERDFYFGKLR NIELICQENE GENDPVLQRI  60
   61 VDILYATDEG FVIPDEGGPQ EEQEEY

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 30.09691
Match: 1txqB
Description: Crystal structure of the EB1 C-terminal domain complexed with the CAP-Gly domain of p150Glued
Matching Structure (courtesy of the PDB):
YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle