YRC Public Data Repository - Protein Structure Prediction

Protein:	BL1S5_MOUSE
Organism:	Mus musculus
Length:	185 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for BL1S5_MOUSE.

Description	E-value	Query Range	Subject Range
gi\|114605402 - gi\|114605402\|ref\|XP_001166060.1\| PREDICTED: muted isoform 3 [Pan troglodytes] MUTED - muted homolog (mouse)	320.0	[0..1]	[185..1]
BL1S5_RAT - Biogenesis of lysosome-related organelles complex 1 subunit 5 OS=Rattus norvegicus GN=Bloc1s5 PE=1 S...	304.0	[0..1]	[185..1]
gi\|76651399 - gi\|76651399\|ref\|XP_581818.2\| PREDICTED: similar to Muted protein homolog [Bos taurus]	265.0	[0..1]	[185..30]
gi\|74004051 - gi\|74004051\|ref\|XP_851825.1\| PREDICTED: similar to Muted protein homolog [Canis familiaris]	264.0	[0..34]	[185..107]
gi\|30017347, gi\|... - ref\|NP_835155.1\| muted [Mus musculus], gi\|26333005\|dbj\|BAC30220.1\| unnamed protein product [Mus mus...	249.0	[0..1]	[130..1]
BL1S5_CHICK - Biogenesis of lysosome-related organelles complex 1 subunit 5 OS=Gallus gallus GN=BLOC1S5 PE=2 SV=1	199.0	[0..17]	[185..28]

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Predicted Domain #1

Region A:
Residues: [1-185]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSGGGTETPV ACDAAQGGKK RDSLGTPGAA HLIIKDLGEI HSRLLDHRPV TQGEIRYFVK  60
   61 EFEEKRGLRE LRVLKNLENT IQETNECLLP KCRETMECGL GETLQRLQAA NDSICRLQQR 120
  121 EQERKKVIND YLTASEKRRL VQWEEFVSGQ PQRRAEVDEE HRRAVERLRE QYAAMEKDLA 180
  181 KFSTF

[Run NCBI BLAST on this sequence.]

Detection Method:	FFAS03
Confidence:	0.967
Match:	2ou6A
Description:	No description for 2ou6A was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits