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View Structure Prediction Details

Protein: IFNL3_MOUSE
Organism: Mus musculus
Length: 193 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for IFNL3_MOUSE.

Description E-value Query
Range
Subject
Range
gi|33285961 - gi|33285961|gb|AAQ01561.1| interleukin 28C [Homo sapiens]
326.0 [0..8] [193..10]
IL28A_MOUSE - Interleukin-28A OS=Mus musculus GN=Il28a PE=2 SV=1
324.0 [0..15] [193..15]
gi|109124657 - gi|109124657|ref|XP_001086865.1| PREDICTED: interleukin 28B (interferon, lambda 3) [Macaca mulatta]
319.0 [0..8] [193..14]

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Predicted Domain #1
Region A:
Residues: [1-193]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLLLLLPLLL AAVLTRTQAD PVPRATRLPV EAKDCHIAQF KSLSPKELQA FKKAKGAIEK  60
   61 RLLEKDMRCS SHLISRAWDL KQLQVQERPK ALQAEVALTL KVWENINDSA LTTILGQPLH 120
  121 TLSHIHSQLQ TCTQLQATAE PKPPSRRLSR WLHRLQEAQS KETPGCLEDS VTSNLFQLLL 180
  181 RDLKCVASGD QCV

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Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle