YRC Public Data Repository - Protein Structure Prediction

Protein:	BOLA1_MOUSE
Organism:	Mus musculus
Length:	137 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for BOLA1_MOUSE.

Description	E-value	Query Range	Subject Range
gi\|62643916, gi\|... - gi\|62643916\|ref\|XP_345254.2\| PREDICTED: similar to bolA-like 1 [Rattus norvegicus], gi\|149030608\|gb\|...	184.0	[0..1]	[137..1]
gi\|55588110, gi\|... - gi\|55588110\|ref\|XP_513766.1\| PREDICTED: bolA-like 1 isoform 3 [Pan troglodytes], gi\|114559186\|ref\|XP... sp\|Q9Y3E2-1\|BOLA... - BolA-like protein 1 OS=Homo sapiens GN=BOLA1 PE=1 SV=1 VAR_033630, BolA-like protein 1 OS=Homo sapie...	184.0	[0..1]	[136..1]
BOLA1 - bolA homolog 1 (E. coli)	184.0	[0..1]	[136..1]
BOLA1_PONPY - BolA-like protein 1 - Pongo pygmaeus (Orangutan) BOLA1_PONAB - BolA-like protein 1 OS=Pongo abelii GN=BOLA1 PE=2 SV=1	181.0	[0..1]	[136..1]
gi\|109015979, gi... - gi\|109015979\|ref\|XP_001096955.1\| PREDICTED: similar to bolA-like 1 isoform 2 [Macaca mulatta], gi\|10...	179.0	[0..1]	[136..1]
gi\|73981250, gi\|... - gi\|73981250\|ref\|XP_849759.1\| PREDICTED: similar to bolA-like 1 isoform 3 [Canis familiaris], gi\|5709...	178.0	[0..1]	[136..1]
BOLA1_BOVIN - BolA-like protein 1 OS=Bos taurus GN=BOLA1 PE=2 SV=1	173.0	[0..1]	[134..1]
gi\|37199524, gi\|... - gi\|37680775\|ref\|NP_935384.1\| cell division protein BolA [Vibrio vulnificus YJ016], gi\|37199524\|dbj\|B...	159.0	[0..9]	[132..7]
gi\|60593683, gi\|... - gi\|60593683\|pdb\|1V60\|A Chain A, Solution Structure Of Bola1 Protein From Mus Musculus, gi\|159163196\|...	158.0	[0..6]	[128..1]
gi\|68393740 - gi\|68393740\|ref\|XP_701456.1\| PREDICTED: hypothetical protein XP_696364 [Danio rerio]	152.0	[0..1]	[133..1]

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Predicted Domain #1

Region A:
Residues: [1-137]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLSARSAQCM VSMATRSCVS RGSAGSAAAG PVEAAIRAKL EQALSPEVLE LRNESGGHAV  60
   61 PAGSETHFRV AVVSSRFEGM SPLQRHRLVH EALSEELAGP VHALAIQAKT PAQWRENPQL 120
  121 DISPPCLGGS KKTRGTS

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	39.30103
Match:	1v60A
Description:	Solution structure of BolA1 protein from Mus musculus
Matching Structure (courtesy of the PDB):

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits