YRC Public Data Repository - Protein Structure Prediction

Protein:	SET_MOUSE
Organism:	Mus musculus
Length:	289 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SET_MOUSE.

Description	E-value	Query Range	Subject Range
gi\|34851993, gi\|... - gi\|60499029\|ref\|NP_001012522.1\| SET translocation [Rattus norvegicus], ref\|XP_226569.2\| similar to A...	331.0	[0..1]	[235..1]
gi\|55153963, gi\|... - gi\|56606037\|ref\|NP_001008551.1\| hypothetical protein LOC434632 [Mus musculus], gi\|55153963\|gb\|AAH852...	327.0	[0..1]	[235..1]
gi\|51464263, gi\|... - gi\|51464263\|ref\|XP_371701.2\| PREDICTED: similar to SET protein (Phosphatase 2A inhibitor I2PP2A) (I-...	326.0	[0..1]	[237..103]
gi\|73968092 - gi\|73968092\|ref\|XP_851207.1\| PREDICTED: similar to SET protein (Phosphatase 2A inhibitor I2PP2A) (I-...	315.0	[0..1]	[235..1]
gi\|109110118 - gi\|109110118\|ref\|XP_001110539.1\| PREDICTED: similar to Protein SET (Phosphatase 2A inhibitor I2PP2A)...	310.0	[0..1]	[235..1]

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Predicted Domain #1

Region A:
Residues: [1-289]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAPKRQSAIL PQPKKPRPAA APKLEDKSAS PGLPKGEKEQ QEAIEHIDEV QNEIDRLNEQ  60
   61 ASEEILKVEQ KYNKLRQPFF QKRSELIAKI PNFWVTTFVN HPQVSALLGE EDEEALHYLT 120
  121 RVEVTEFEDI KSGYRIDFYF DENPYFENKV LSKEFHLNES GDPSSKSTEI KWKSGKDLTK 180
  181 RSSQTQNKAS RKRQHEEPES FFTWFTDHSD AGADELGEVI KDDIWPNPLQ YYLVPDMDDE 240
  241 EGEAEDDDDD DEEEEGLEDI DEEGDEDEGE EDDDEDEGEE GEEDEGEDD

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	76.69897
Match:	2e50A
Description:	No description for 2e50A was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits