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View Structure Prediction Details

Protein: THG1_MOUSE
Organism: Mus musculus
Length: 298 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for THG1_MOUSE.

Description E-value Query
Range
Subject
Range
gi|62530979 - gi|62530979|gb|AAH92541.1| Thg1l protein [Mus musculus]
524.0 [0..1] [298..1]
THG1_RAT - Probable tRNA(His) guanylyltransferase OS=Rattus norvegicus GN=Thg1l PE=2 SV=1
523.0 [0..1] [298..1]
gi|8923514, gi|2... - gi|8923514|ref|NP_060342.1| interphase cyctoplasmic foci protein 45 [Homo sapiens], gi|7020726|dbj|B...
523.0 [0..1] [298..1]
gi|114603135 - gi|114603135|ref|XP_518066.2| PREDICTED: interphase cytoplasmic foci protein 45 [Pan troglodytes]
522.0 [0..1] [298..1]
gi|109079563 - gi|109079563|ref|XP_001113603.1| PREDICTED: similar to interphase cyctoplasmic foci protein 45 [Maca...
519.0 [0..1] [298..1]
gi|57085243 - gi|57085243|ref|XP_536453.1| PREDICTED: similar to interphase cyctoplasmic foci protein 45 [Canis fa...
510.0 [0..1] [298..101]
THG1_BOVIN - Probable tRNA(His) guanylyltransferase OS=Bos taurus GN=THG1L PE=2 SV=1
505.0 [0..1] [298..1]

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Predicted Domain #1
Region A:
Residues: [1-196]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWAFRTARIG SLLAATSVIL RRCLRLGVAM AKSKFEYVRN FEVQDTCLPH CWVVVRLDGR  60
   61 NFHRFAEEHN FAKPNDSRAL HLMTKCAQTV MEELEDIVIA YGQSDEYSFV FRKKSNWFKR 120
  121 RASKFMTLVA SQFASSYVFY WRDYFEDQPL RYPPGFDGRV VLYPSNQTLK DYLSWRQADC 180
  181 HINNLYNTVF WALIQQ

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [197-298]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SGLTPVQAQQ RLKGTLTADK NEILFSEFHI NYNNEPHMYR KGTVLVWQKV EEVRTQEVRL  60
   61 PAEMEGEKKA VARTRTRVVA LNCDLIGDAF WKEHPEILAE EN

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.290 0.168 tRNA processing a.35.1 lambda repressor-like DNA-binding domains
View Download 0.247 0.048 tRNA processing c.10.1 RNI-like
View Download 0.231 N/A N/A c.8.1 Phosphohistidine domain


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle