YRC Public Data Repository - Protein Structure Prediction

Protein:	DDAH1_MOUSE
Organism:	Mus musculus
Length:	285 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for DDAH1_MOUSE.

Description	E-value	Query Range	Subject Range
DDAH1_RAT - N(G),N(G)-dimethylarginine dimethylaminohydrolase 1 OS=Rattus norvegicus GN=Ddah1 PE=1 SV=3	280.0	[0..1]	[285..1]
DDAH1 - dimethylarginine dimethylaminohydrolase 1 gi\|109009539 - gi\|109009539\|ref\|XP_001108967.1\| PREDICTED: dimethylarginine dimethylaminohydrolase 1 [Macaca mulatt...	276.0	[0..1]	[285..1]
gi\|114557500 - gi\|114557500\|ref\|XP_001142408.1\| PREDICTED: similar to NG,NG-dimethylarginine dimethylaminohydrolase...	276.0	[0..1]	[285..1]
gi\|57088769 - gi\|57088769\|ref\|XP_547303.1\| PREDICTED: similar to dimethylarginine dimethylaminohydrolase 1 [Canis ...	269.0	[0..1]	[285..1]
DDH1_BOVIN, DDAH... - (P56965) NG,NG-dimethylarginine dimethylaminohydrolase 1 (EC 3.5.3.18) (Dimethylargininase 1) (Dimet...	263.0	[0..4]	[285..3]
gi\|30268648, gi\|... - gi\|45383392\|ref\|NP_989713.1\| dimethylarginine dimethylaminohydrolase 1 [Gallus gallus], gi\|30268648\|...	258.0	[0..1]	[281..1]
gi\|33417138, gi\|... - gi\|33417138\|gb\|AAH56074.1\| Ddah1-prov protein [Xenopus laevis], gi\|147901998\|ref\|NP_001080883.1\| dim...	252.0	[0..1]	[282..1]
gi\|115527576, gi... - gi\|187608183\|ref\|NP_001120524.1\| hypothetical protein LOC100145661 [Xenopus (Silurana) tropicalis], ...	250.0	[0..1]	[283..1]
ARCA_BACCN - Arginine deiminase OS=Bacillus cytotoxicus (strain DSM 22905 / CIP 110041 / 391-98 / NVH 391-98) GN=...	248.0	[0..9]	[283..101]
ARCA_BACC1 - Arginine deiminase OS=Bacillus cereus (strain ATCC 10987 / NRS 248) GN=arcA PE=3 SV=1	247.0	[0..9]	[283..101]

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Predicted Domain #1

Region A:
Residues: [1-285]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGLGHPSAF GRATHAVVRA PPESLCRHAL RRSQGEEVDF ARAERQHELY VGVLGSKLGL  60
   61 QVVQLPADES LPDCVFVEDV AVVCEETALI TRPGAPSRRK EVDMMKEALE KLQLNIVEMK 120
  121 DENATLDGGD VLFTGREFFV GLSKRTNQRG AEILADTFKD YAVSTVPVAD SLHLKSFCSM 180
  181 AGPNLIAIGS SESAQKALKI MQQMSDHRYD KLTVPDDMAA NCIYLNIPSK GHVLLHRTPE 240
  241 EYPESAKVYE KLKDHLLIPV SNSEMEKVDG LLTCCSVFIN KKIDS

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	74.522879
Match:	2jaiA
Description:	No description for 2jaiA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits