YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: CDN2B_MOUSE
Organism: Mus musculus
Length: 130 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CDN2B_MOUSE.

Description E-value Query
Range
Subject
Range
gi|28373837 - gi|28373837|pdb|1N0R|A Chain A, 4ank: A Designed Ankyrin Repeat Protein With Four Identical Consensu...
164.0 [0..5] [129..1]
gi|115621182, gi... - gi|115951148|ref|XP_001197526.1| PREDICTED: similar to ankyrin 2,3/unc44 [Strongylocentrotus purpura...
162.0 [0..4] [130..208]
gi|66845005, gi|... - gi|70983704|ref|XP_747379.1| NACHT and Ankyrin domain protein [Aspergillus fumigatus Af293], gi|6684...
160.0 [0..2] [130..534]
gi|85701704, gi|... - gi|85701704|ref|NP_001028370.1| ankyrin repeat domain 50 [Mus musculus], gi|74194058|dbj|BAE36940.1|...
160.0 [0..3] [129..16]
gi|76630331 - gi|76630331|ref|XP_882153.1| PREDICTED: similar to kinase D-interacting substance of 220 kDa isoform...
159.0 [0..1] [130..66]
gi|115433911, gi... - gi|115433911|ref|XP_001217610.1| conserved hypothetical protein [Aspergillus terreus NIH2624], gi|11...
159.0 [0..4] [130..1000]
gi|11321435 - gi|11321435|gb|AAG34167.1| ankyrin repeat-rich membrane-spanning protein [Rattus norvegicus]
158.0 [0..1] [130..66]
gi|50744999 - gi|50744999|ref|XP_419939.1| PREDICTED: similar to KIAA1250 protein [Gallus gallus]
158.0 [0..1] [130..274]
gi|73979700 - gi|73979700|ref|XP_855938.1| PREDICTED: similar to kinase D-interacting substance of 220 kDa isoform...
158.0 [0..1] [130..66]

Back

Predicted Domain #1
Region A:
Residues: [1-130]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLGGSSDAGL ATAAARGQVE TVRQLLEAGA DPNALNRFGR RPIQVMMMGS AQVAELLLLH  60
   61 GAEPNCADPA TLTRPVHDAA REGFLDTLVV LHRAGARLDV CDAWGRLPVD LAEEQGHRDI 120
  121 ARYLHAATGD 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 22.30103
Match: 1d9sA
Description: Tumor suppressor p15(ink4b)
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle