YRC Public Data Repository - Protein Structure Prediction

Protein:	KR151_MOUSE
Organism:	Mus musculus
Length:	150 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for KR151_MOUSE.

Description	E-value	Query Range	Subject Range
gi\|109491840 - gi\|109491840\|ref\|XP_001081426.1\| PREDICTED: similar to keratin associated protein 4-7 [Rattus norveg...	139.0	[0..1]	[134..1]
gi\|114667485 - gi\|114667485\|ref\|XP_523642.2\| PREDICTED: similar to keratin associated protein 4.3 [Pan troglodytes]	135.0	[0..1]	[146..1]
gi\|94391999, gi\|... - gi\|94391999\|ref\|XP_986708.1\| PREDICTED: hypothetical protein [Mus musculus], gi\|154759236\|ref\|NP_001...	134.0	[0..1]	[146..1]
KRTAP4-3 - keratin associated protein 4-3	133.0	[0..1]	[146..1]

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Predicted Domain #1

Region A:
Residues: [1-150]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSYTCNSGNY SSQSFGGFLR QPVSTYNSFY PTSNVVYSPK NFQLGSSFYN GQQETFSEPL  60
   61 EGHLPCVGSA SFHTSCFRPK QYFSSPCQGG FTGSFGYGNT GFGAFGFGSS GIRSQGCGSN 120
  121 FYRPGYFSSK SIQSSYYQPG YSSGFCGSNF

[Run NCBI BLAST on this sequence.]

Detection Method:	FFAS03
Confidence:	2.51
Match:	2gttW
Description:	No description for 2gttW was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits