YRC Public Data Repository - Protein Structure Prediction

Protein:	UTS2_MOUSE
Organism:	Mus musculus
Length:	123 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for UTS2_MOUSE.

Description	E-value	Query Range	Subject Range
UTS2_RAT - Urotensin-2 OS=Rattus norvegicus GN=Uts2 PE=2 SV=1	184.0	[0..1]	[123..1]
UTS2_MACMU - Urotensin-2 OS=Macaca mulatta GN=UTS2 PE=2 SV=1	178.0	[0..1]	[123..1]
gi\|114552295 - gi\|114552295\|ref\|XP_001157678.1\| PREDICTED: urotensin 2 isoform 2 [Pan troglodytes] UTS2 - urotensin 2	174.0	[0..1]	[123..1]
gi\|61859014 - gi\|61859014\|ref\|XP_582447.1\| PREDICTED: similar to urotensin II transcript [Bos taurus]	170.0	[0..1]	[123..1]
UTS2_PIG - Urotensin-2 OS=Sus scrofa GN=UTS2 PE=2 SV=1	164.0	[0..19]	[123..18]
gi\|46195848, gi\|... - gi\|46195848\|ref\|NP_996873.1\| urotensin 2 [Gallus gallus], gi\|45551420\|gb\|AAS68021.1\| preprourotensin...	164.0	[0..1]	[123..1]
UTS2G_CYPCA - Prepro-urotensin II-gamma OS=Cyprinus carpio PE=1 SV=1	160.0	[0..17]	[123..18]

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Predicted Domain #1

Region A:
Residues: [1-123]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDRVPFCCLL FIGLLNPLLS LPVTDTGERT LQLPVLEEDA LRALEELERM ALLQTLRQTM  60
   61 GTEAGESPGE AGPSTETPTP RGSMRKAFAG QNSNTVLSRL LARTRKQHKQ HGAAPECFWK 120
  121 YCI

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits