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View Structure Prediction Details

Protein: NOL3_MOUSE
Organism: Mus musculus
Length: 220 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for NOL3_MOUSE.

Description E-value Query
Range
Subject
Range
gi|70878483 - gi|70878483|gb|EAN91735.1| trans-sialidase, putative [Trypanosoma cruzi]
gi|71649745 - gi|71649745|ref|XP_813586.1| trans-sialidase [Trypanosoma cruzi strain CL Brener]
134.0 [0..2] [219..787]
gi|8163672 - gi|8163672|gb|AAF73794.1|AF154025_1 surface protein PspC [Streptococcus pneumoniae]
133.0 [0..6] [218..205]
PRP2_MEDTR - Repetitive proline-rich cell wall protein 2 OS=Medicago truncatula GN=PRP2 PE=2 SV=1
128.0 [0..2] [218..42]

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Predicted Domain #1
Region A:
Residues: [1-81]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGNVQERPSE TIDRERKRLV ETLQADSGLL LDALVARGVL TGPEYEALDA LPDAERRVRR  60
   61 LLLLVQSKGE AACQELLRCA Q

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 11.0
Match: PF00619.12
Description: No description for PF00619.12 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [82-220]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QTVRMPDPAW DWQHVGPGYR NRSYDPSCPG HWTPEAPSSG TTCPELPRAS EQEEVGGPEG  60
   61 SEALQPRTPE EPELEAEATE GDEPDLEQEM NPEQEPEPEP EPEPEPEPEP EPEPEPEPEP 120
  121 EPEPEPEPDF QEEDESEDS

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.17
Match: 2j63A
Description: No description for 2j63A was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle