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View Structure Prediction Details

Protein: PRM2_MOUSE
Organism: Mus musculus
Length: 107 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PRM2_MOUSE.

Description E-value Query
Range
Subject
Range
gi|1359529 - gi|1359529|emb|CAA87062.1| protamine 2 [Rattus norvegicus]
54.0 [0..1] [62..1]
PRM2_RATFU - Protamine-2 OS=Rattus fuscipes GN=Prm2 PE=2 SV=1
50.0 [0..1] [41..1]
PRM2_RATTU - Protamine-2 OS=Rattus tunneyi GN=Prm2 PE=2 SV=1
49.0 [0..1] [65..1]
gi|15430640, gi|... - gi|15430640|gb|AAK98523.1|AF268204_1 protamine 2 [Mesocricetus auratus], gi|15430638|gb|AAK98522.1|A...
49.0 [0..1] [41..1]

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Predicted Domain #1
Region A:
Residues: [1-107]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVRYRMRSPS EGPHQGPGQD HEREEQGQGQ GLSPERVEDY GRTHRGHHHH RHRRCSRKRL  60
   61 HRIHKRRRSC RRRRRHSCRH RRRHRRGCRR SRRRRRCRCR KCRRHHH

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 50.49485
Match: PF00841.10
Description: No description for PF00841.10 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle