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View Structure Prediction Details

Protein: LAGE3_MOUSE
Organism: Mus musculus
Length: 148 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for LAGE3_MOUSE.

Description E-value Query
Range
Subject
Range
gi|20071086 - gi|20071086|gb|AAH27305.1| Lage3 protein [Mus musculus]
227.0 [0..1] [148..1]
gi|157821989, gi... - gi|34881763|ref|XP_215227.2| PREDICTED: similar to Eso3 protein [Rattus norvegicus], gi|157821989|re...
224.0 [0..1] [148..1]
gi|49076972, gi|... - gi|71021407|ref|XP_760934.1| hypothetical protein UM04787.1 [Ustilago maydis 521], ref|XP_402402.1| ...
155.0 [0..1] [144..483]
gi|118341658, gi... - gi|56567192|gb|AAV98585.1| LAGE-1a protein transcript variant 1 [Homo sapiens], gi|3255959|emb|CAA11...
149.0 [0..27] [144..54]

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Predicted Domain #1
Region A:
Residues: [1-148]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQTAHTGLSH TADGADGQTS RCCPGNAGTK AVIPSGAHPV ARALEASRNS SKSMVPLTQR  60
   61 PGTRHHRFSL FVPFPTSLEA EIACGSLVPD VEPHRGLVGK ELKVSGCMLE VRWIAEDSRL 120
  121 LRLSIINFLD QLSLVVNTIQ LFGPPVSC

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 40.236572
Match: PF09341.1
Description: No description for PF09341.1 was found.

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.452 N/A N/A d.198.1 Type III secretory system chaperone
View Download 0.440 N/A N/A d.198.1 Type III secretory system chaperone
View Download 0.431 N/A N/A c.51.6 Description not found.
View Download 0.403 N/A N/A a.25.1 Ferritin-like
View Download 0.351 N/A N/A d.198.1 Type III secretory system chaperone
View Download 0.312 N/A N/A d.129.3 Bet v1-like
View Download 0.311 N/A N/A d.224.1 SufE-like
View Download 0.296 N/A N/A c.65.1 Formyltransferase
View Download 0.277 N/A N/A d.198.1 Type III secretory system chaperone
View Download 0.259 N/A N/A c.65.1 Formyltransferase


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