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View Structure Prediction Details

Protein: TIPIN_MOUSE
Organism: Mus musculus
Length: 278 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TIPIN_MOUSE.

Description E-value Query
Range
Subject
Range
gi|12834131 - gi|12834131|dbj|BAB22798.1| unnamed protein product [Mus musculus]
393.0 [0..1] [278..1]
TIPIN_RAT - TIMELESS-interacting protein OS=Rattus norvegicus GN=Tipin PE=2 SV=1
371.0 [0..1] [278..1]
HGNC:30750|MIM:6... - interacting protein
gi|117645640 - gi|117645640|emb|CAL38286.1| hypothetical protein [synthetic construct]
TIPIN - TIMELESS interacting protein
326.0 [0..1] [276..1]
gi|109081570 - gi|109081570|ref|XP_001110143.1| PREDICTED: similar to timeless-interacting protein [Macaca mulatta]
314.0 [0..1] [276..1]
gi|114657768, gi... - gi|114657770|ref|XP_001174733.1| PREDICTED: timeless-interacting protein isoform 1 [Pan troglodytes]...
312.0 [0..1] [276..1]
TIPIN_BOVIN - TIMELESS-interacting protein OS=Bos taurus GN=TIPIN PE=2 SV=1
312.0 [0..1] [275..1]
gi|20977030 - gi|20977030|gb|AAM33248.1| mitotic phosphoprotein 67 [Xenopus laevis]
306.0 [0..1] [258..177]

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Predicted Domain #1
Region A:
Residues: [1-147]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLEQEENGLF EIPDYEHVED ETFPPFPPPA SPERDPADAE PEEGSGSGVP VPPKRTVKRN  60
   61 LPKLDATRLT SERGLPALRH VFDKTKFKGK GHEAEDLKTL IRHMEHWAHR LFPKLQFEDF 120
  121 IDRVENLGNK KEVQTCLKRI RLDLPIV

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 48.107905
Match: PF07962.3
Description: No description for PF07962.3 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [148-278]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 HEDFVNNNDE VGEANGPDVS ATGFDPFLTS SSDSRKFASE PTRSLTEEQQ QRIERNKQLA  60
   61 LERRQAKLLS NSQSLENDVT VEENSTGEDQ EESNGLNIDT ADGPHDVPFA STHEEEQCKA 120
  121 EETQLDHTNL D

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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