YRC Public Data Repository - Protein Structure Prediction

Protein:	FIS1_MOUSE
Organism:	Mus musculus
Length:	152 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FIS1_MOUSE.

Description	E-value	Query Range	Subject Range
gi\|114615095 - gi\|114615095\|ref\|XP_001143081.1\| PREDICTED: similar to Fission 1 (mitochondrial outer membrane) homo...	239.0	[0..1]	[152..245]
FIS1_RAT - Mitochondrial fission 1 protein OS=Rattus norvegicus GN=Fis1 PE=1 SV=1	214.0	[0..1]	[152..1]
ENSPTRT00000036161 - null FIS1 - fission 1 (mitochondrial outer membrane) homolog (S. cerevisiae) gi\|109066186 - gi\|109066186\|ref\|XP_001108062.1\| PREDICTED: fission 1 (mitochondrial outer membrane) homolog (S. cer...	209.0	[0..1]	[152..1]
gi\|57087495 - gi\|57087495\|ref\|XP_536854.1\| PREDICTED: similar to Tetratricopeptide repeat protein 11 (TPR repeat p...	209.0	[0..1]	[152..1]
gi\|4929739, gi\|7... - gi\|7705632\|ref\|NP_057152.1\| tetratricopeptide repeat domain 11 [Homo sapiens], gi\|4929739\|gb\|AAD3413...	209.0	[0..1]	[152..1]
FIS1_BOVIN - Mitochondrial fission 1 protein OS=Bos taurus GN=FIS1 PE=2 SV=1	207.0	[0..1]	[152..1]
gi\|38106670, gi\|... - gi\|39975997\|ref\|XP_369389.1\| conserved hypothetical protein [Magnaporthe grisea 70-15], gb\|EAA52947.... gi\|59802875 - gi\|59802875\|gb\|AAX07651.1\| hypothetical protein [Magnaporthe grisea]	192.0	[0..6]	[151..12]
FIS1_NEUCR - Mitochondria fission 1 protein OS=Neurospora crassa GN=fis-1 PE=3 SV=1 FIS1_NEUCR - Mitochondria fission 1 protein OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / D...	191.0	[0..6]	[151..11]
gi\|115384252, gi... - gi\|115384252\|ref\|XP_001208673.1\| conserved hypothetical protein [Aspergillus terreus NIH2624], gi\|11...	188.0	[0..7]	[140..8]

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Predicted Domain #1

Region A:
Residues: [1-152]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEAVLNELVS VEDLKNFERK FQSEQAAGSV SKSTQFEYAW CLVRSKYNED IRRGIVLLEE  60
   61 LLPKGSKEEQ RDYVFYLAVG NYRLKEYEKA LKYVRGLLQT EPQNNQAKEL ERLIDKAMKK 120
  121 DGLVGMAIVG GMALGVAGLA GLIGLAVSKS KS

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	52.221849
Match:	1pc2A
Description:	Solution structure of human mitochondria fission protein Fis1
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
binding	0.02652482814057	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: