YRC Public Data Repository - Protein Structure Prediction

Protein:	ALG14_MOUSE
Organism:	Mus musculus
Length:	217 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ALG14_MOUSE.

Description	E-value	Query Range	Subject Range
ALG14_RAT - UDP-N-acetylglucosamine transferase subunit ALG14 homolog OS=Rattus norvegicus GN=Alg14 PE=2 SV=1	201.0	[0..1]	[217..1]
gi\|37197539, gi\|... - gi\|37678798\|ref\|NP_933407.1\| N-acetylglucosaminyl transferase [Vibrio vulnificus YJ016], gi\|37197539...	196.0	[0..20]	[217..7]
gi\|109011359 - gi\|109011359\|ref\|XP_001103820.1\| PREDICTED: similar to asparagine-linked glycosylation 14 homolog [M...	196.0	[0..1]	[217..1]
gi\|163644898 - gi\|163644898\|gb\|ABY28338.1\| yeast codon-optimized human ALG14 [synthetic construct] ALG14 - asparagine-linked glycosylation 14 homolog (S. cerevisiae)	193.0	[0..1]	[217..1]
MURG_VIBF1 - UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosam...	193.0	[0..31]	[217..1]
gi\|91187948, gi\|... - gi\|91228514\|ref\|ZP_01262436.1\| N-acetylglucosaminyl transferase [Vibrio alginolyticus 12G01], gi\|911...	193.0	[0..32]	[217..1]
gi\|84374933, gi\|... - gi\|84394434\|ref\|ZP_00993150.1\| N-acetylglucosaminyl transferase [Vibrio splendidus 12B01], gi\|843749...	191.0	[0..32]	[217..1]
MURG_HAES1 - UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosam...	191.0	[0..32]	[217..1]
MURG_VIBPA - UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosam... MURG_VIBPA - UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosam... gi\|153839053, gi... - gi\|153839053\|ref\|ZP_01991720.1\| undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyl...	190.0	[0..32]	[217..1]
gi\|77962098 - gi\|77962098\|ref\|ZP_00825923.1\| COG0707: UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase ...	190.0	[0..31]	[217..1]

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Predicted Domain #1

Region A:
Residues: [1-217]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLSILILAAT AAGLVILLFQ RLWTVLGPHH VTPRESLRLL IVAGSGGHTT EILRLVGSLS  60
   61 NAYSPRHYVI AESDEMSAKK IHSLEELSRA QNDSTTEYPK YHLHRIPRSR EVRQSWLSSV 120
  121 FTTFYSMWFS FPLVLRIKPD LVLCNGPGTC VPICVSALLL GILGVKKVII VYVESICRVE 180
  181 TLSLSGKILR HLSDYFIVQW PTLKEKYPKS VYLGRIV

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	47.522879
Match:	1f0kA
Description:	Peptidoglycan biosynthesys glycosyltransferase MurG
Matching Structure (courtesy of the PDB):

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits