YRC Public Data Repository - Protein Structure Prediction

Protein:	LECT2_MOUSE
Organism:	Mus musculus
Length:	151 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for LECT2_MOUSE.

Description	E-value	Query Range	Subject Range
gi\|109078700 - gi\|109078700\|ref\|XP_001111039.1\| PREDICTED: similar to leukocyte cell-derived chemotaxin 2 precursor...	280.0	[0..1]	[151..1]
gi\|114601806 - gi\|114601806\|ref\|XP_517944.2\| PREDICTED: leukocyte cell-derived chemotaxin 2 [Pan troglodytes] LECT2 - leukocyte cell-derived chemotaxin 2	280.0	[0..1]	[151..1]
LECT2_BOVIN - Leukocyte cell-derived chemotaxin-2 OS=Bos taurus GN=LECT2 PE=1 SV=1	279.0	[0..1]	[151..1]
gi\|59806345, gi\|... - gi\|59806345\|ref\|NP_002293.2\| leukocyte cell-derived chemotaxin 2 precursor [Homo sapiens], gi\|233507...	278.0	[0..1]	[151..1]
gi\|57093551 - gi\|57093551\|ref\|XP_531913.1\| PREDICTED: similar to leukocyte cell-derived chemotaxin 2 precursor [Ca...	273.0	[0..1]	[151..1]
gi\|109504639 - gi\|109504639\|ref\|XP_341487.2\| PREDICTED: similar to Leukocyte cell-derived chemotaxin 2 precursor (C...	272.0	[0..8]	[149..1]
gi\|74203518, gi\|... - gi\|74203518\|dbj\|BAE20911.1\| unnamed protein product [Mus musculus], gi\|3641667\|dbj\|BAA33385.1\| LECT2...	261.0	[0..1]	[151..1]

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Predicted Domain #1

Region A:
Residues: [1-151]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIPTTILISA ALLSSALAGP WANICASKSS NEIRTCDSYG CGQYSAQRTQ RHHPGVDVLC  60
   61 SDGSVVYAPF TGKIVGQEKP YRNKNAINDG IRLSGRGFCV KIFYIKPIKY KGSIKKGEKL 120
  121 GTLLPLQKIY PGIQSHVHVE NCDSSDPTAY L

[Run NCBI BLAST on this sequence.]

Detection Method:	FFAS03
Confidence:	4.84
Match:	2hsiA
Description:	No description for 2hsiA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits