YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: ARP19_MOUSE
Organism: Mus musculus
Length: 112 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ARP19_MOUSE.

Description E-value Query
Range
Subject
Range
gi|76649484 - gi|76649484|ref|XP_875557.1| PREDICTED: similar to cAMP-regulated phosphoprotein 19 (ARPP-19) [Bos t...
189.0 [0..1] [112..276]
gi|109016435 - gi|109016435|ref|XP_001106271.1| PREDICTED: similar to endosulfine alpha isoform 6 [Macaca mulatta]
176.0 [0..14] [112..62]
gi|30268365 - gi|30268365|emb|CAD89929.1| hypothetical protein [Homo sapiens]
172.0 [0..1] [112..22]
ARP19_CHICK - cAMP-regulated phosphoprotein 19 OS=Gallus gallus GN=ARPP19 PE=3 SV=3
167.0 [0..1] [112..1]

Back

Predicted Domain #1
Region A:
Residues: [1-112]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSAEVPEAAS AEEQKEMEDK VTSPEKAEEA KLKARYPHLG QKPGGSDFLR KRLQKGQKYF  60
   61 DSGDYNMAKA KMKNKQLPAA APDKTEVTGD HIPTPQDLPQ RKPSLVASKL AG

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 55.167491
Match: PF04667.8
Description: No description for PF04667.8 was found.

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.300 N/A N/A a.60.8 HRDC-like
View Download 0.243 N/A N/A a.79.1 Antitermination factor NusB
View Download 0.201 N/A N/A a.74.1 Cyclin-like
View Download 0.201 N/A N/A a.79.1 Antitermination factor NusB


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle