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View Structure Prediction Details

Protein: CE39864
Organism: Caenorhabditis elegans
Length: 180 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE39864.

Description E-value Query
Range
Subject
Range
gi|108870188, gi... - gi|157135551|ref|XP_001663494.1| lethal(2)essential for life protein, l2efl [Aedes aegypti], gi|1088...
130.0 [0..6] [176..16]

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Predicted Domain #1
Region A:
Residues: [1-180]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATFNTTSSY NRTYEKKVIE EGSPNVRVTT QTHTAIPGMP DLGNIHSSML SNFPNLAISS  60
   61 PSVVGSQNGN LTSIRVTNTS FHAILDVSKY DADSLKVTVV DNNIIVEGSH GEKEDTYGTI 120
  121 ESTFKRRFPL PKAVAPESVQ SQLTADGHLT IDAKAPEPKQ EGARPIQIKV INTSAEQQKQ 180
  181 

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Detection Method: PSI-BLAST
Confidence: 10.69897
Match: 2bolA
Description: CRYSTAL STRUCTURE AND ASSEMBLY OF TSP36, A METAZOAN SMALL HEAT SHOCK PROTEIN
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle