| Protein: | ham-2 |
| Organism: | Caenorhabditis elegans |
| Length: | 331 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ham-2.
| Description | E-value | Query Range |
Subject Range |
|
|
391.0 | [0..1] | [331..79] |
|
Region A: Residues: [1-112] |
1 11 21 31 41 51
| | | | | |
1 MYRVHNITRM FMCRCCNWAF PDKTSLHIHM QSMLKNGTPG EAAVLAKSSD VVDSTSESGS 60
61 PRQSPPFSPD LLMQKRMLQV AANNNNIGSI FPTLLKSPDS KSMFPLDLSN MG
|
| Detection Method: |  |
| Confidence: | 2.18 |
| Match: | 2dmdA |
| Description: | No description for 2dmdA was found. |
| Term | Confidence | Notes |
| binding | 0.304205134456748 | bayes_pls_golite062009 |
|
Region A: Residues: [113-244] |
1 11 21 31 41 51
| | | | | |
1 PSQFLSAWLA NNPINTAALN LAAQQTPSKD SIQSSNISDY DDLEVQTTEE DIKFEVESSD 60
61 VSPRSVIVKT EPTFKRELEH DADIDVEGDD GEPPLKMTID DKNIHISHDQ PSPTVSDSHI 120
121 SGGSSSHSGE SL
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [245-331] |
1 11 21 31 41 51
| | | | | |
1 KCFDCQVARG KLVAVEDKCR AYEKTIRELQ VQVDFLRKIQ PNPMPPVMLP PPMMPMPSPG 60
61 PNNLFQNPAM RMLLNNLIHM NRPSVVP
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
