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View Structure Prediction Details

Protein: CCG6_MOUSE
Organism: Mus musculus
Length: 260 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CCG6_MOUSE.

Description E-value Query
Range
Subject
Range
CCG6_RAT - Voltage-dependent calcium channel gamma-6 subunit OS=Rattus norvegicus GN=Cacng6 PE=2 SV=1
250.0 [0..1] [260..1]
gi|109731952 - gi|109731952|gb|AAI15457.1| Calcium channel, voltage-dependent, gamma subunit 6 [Mus musculus]
242.0 [0..1] [260..1]
gi|194675466, gi... - gi|76642423|ref|XP_599883.2| PREDICTED: similar to Voltage-dependent calcium channel gamma-6 subunit...
223.0 [0..1] [256..2]
gi|114678977 - gi|114678977|ref|XP_001174737.1| PREDICTED: voltage-dependent calcium channel gamma-6 subunit isofor...
220.0 [0..1] [256..1]
CACNG6 - calcium channel, voltage-dependent, gamma subunit 6
gi|123997069, gi... - gi|157928982|gb|ABW03776.1| calcium channel, voltage-dependent, gamma subunit 6 [synthetic construct...
220.0 [0..1] [256..1]
gi|73947617 - gi|73947617|ref|XP_541431.2| PREDICTED: similar to Voltage-dependent calcium channel gamma-6 subunit...
215.0 [0..1] [256..1]
CCG1_PIG - Voltage-dependent calcium channel gamma-1 subunit OS=Sus scrofa GN=CACNG1 PE=2 SV=1
209.0 [0..31] [250..1]
CCG1_RABIT - Voltage-dependent calcium channel gamma-1 subunit OS=Oryctolagus cuniculus GN=CACNG1 PE=1 SV=1
207.0 [0..31] [250..1]
gi|50757857 - gi|50757857|ref|XP_415680.1| PREDICTED: similar to Voltage-dependent calcium channel gamma-1 subunit...
195.0 [0..30] [250..259]

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Predicted Domain #1
Region A:
Residues: [1-67]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMWSNFFMQE EDRRRTAVGR RRAQEQQNLG LTPEREGKIK LGLLVAIVGA TLAVLAVGTE  60
   61 FWVELNT

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [68-260]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 YKTNGSAVCE AAHLGLWKVC IKRLWQADVP AGRETCGPAE LPGEANCTYF KFFTTGENAR  60
   61 IFQRTTKKEV NLAAAVIAVL GLTAMALGCL CVIMVLSKGA ESLLRLGAVC FGLSGLLLFV 120
  121 SLEVFRHSVG ALLQGVNPET PPAPRLAYEY SWSLGCGVGA GLILLLGGVC FLLLTLPSWP 180
  181 WRSLCPKWGG PTA

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle