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View Structure Prediction Details

Protein: gi|145327707, gi...
Organism: Arabidopsis thaliana
Length: 366 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|145327707, gi....

Description E-value Query
Range
Subject
Range
EXL2_ARATH - GDSL esterase/lipase EXL2 OS=Arabidopsis thaliana GN=EXL2 PE=2 SV=1
352.0 [0..1] [366..1]
gi|92886160 - gi|92886160|gb|ABE88162.1| Lipolytic enzyme, G-D-S-L [Medicago truncatula]
326.0 [0..11] [366..1]
gi|115478062, gi... - gi|115478062|ref|NP_001062626.1| Os09g0132200 [Oryza sativa (japonica cultivar-group)], gi|113630859...
316.0 [0..27] [363..9]

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Predicted Domain #1
Region A:
Residues: [1-107]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKRNSINIHH VTSFSSSPFW CVFFLVLLCK TSTNALVKQP PNETTPAIIV FGDSIVDAGN  60
   61 NDDIMTTLAR CNYPPYGIDF DGGIPTGRFC NGKVATDFIA GKFGIKP

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [108-203]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SIPAYRNPNL KPEDLLTGVT FASGGAGYVP FTTQLSGGIA LSQQLKLFEE YVEKMKKMVG  60
   61 EERTKLIIKN SLFMVICGSN DITNTYFGLP SVQQQY

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [204-366]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DVASFTTLMA DNARSFAQKL HEYGARRIQV FGAPPVGCVP SQRTLAGGPT RNCVVRFNDA  60
   61 TKLYNVKLAA NLGSLSRTLG DKTIIYVDIY DSLLDIILDP RQYGFKVVDK GCCGTGLIEV 120
  121 ALLCNNFAAD VCPNRDEYVF WDSFHPTEKT YRIMATKYFE RYV

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle