YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|123228999, gi...
Organism:	Mus musculus
Length:	262 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|123228999, gi....

Description	E-value	Query Range	Subject Range
TAZ_SAISC - Tafazzin OS=Saimiri sciureus GN=TAZ PE=3 SV=1 TAZ_ERYPA - Tafazzin OS=Erythrocebus patas GN=TAZ PE=2 SV=1	232.0	[0..1]	[262..1]
gi\|48527590 - gi\|48527590\|gb\|AAT45908.1\| tafazzin [Macaca mulatta]	232.0	[0..1]	[262..1]
gi\|149029871, gi... - gi\|71043828\|ref\|NP_001020919.1\| tafazzin [Rattus norvegicus], gi\|68533868\|gb\|AAH99221.1\| Tafazzin [R...	231.0	[0..1]	[262..1]
gi\|29568133, gi\|... - gi\|57284188\|emb\|CAI43209.1\| tafazzin (cardiomyopathy, dilated 3A (X-linked); endocardial fibroelasto...	230.0	[0..1]	[262..1]
gi\|61852392, gi\|... - gi\|76658936\|ref\|XP_869798.1\| PREDICTED: similar to tafazzin isoform 2 isoform 3 [Bos taurus], gi\|618...	227.0	[0..1]	[259..1]
gi\|74008850, gi\|... - gi\|74008850\|ref\|XP_867680.1\| PREDICTED: similar to tafazzin isoform 2 [Canis familiaris], gi\|7400884...	226.0	[0..1]	[261..1]
TAZ_PANTR - Tafazzin OS=Pan troglodytes GN=TAZ PE=3 SV=1	219.0	[0..1]	[262..1]
gi\|48527575 - gi\|48527575\|gb\|AAT45905.1\| tafazzin [Gorilla gorilla] gi\|48527585 - gi\|48527585\|gb\|AAT45907.1\| tafazzin [Hylobates sp. IGL-2004] TAZ_GORGO - Tafazzin OS=Gorilla gorilla gorilla GN=TAZ PE=3 SV=1	219.0	[0..1]	[262..1]

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Predicted Domain #1

Region A:
Residues: [1-262]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPLHVKWPFP AVPRLTWTLA SSVVMGLVGT YSCFWTKYMN HLTVHNKEVL YELIENRGPA  60
   61 TPLITVSNHQ SCMDDPHLWG ILKLRHIWNL KLMRWTPAAA DICFTKELHS HFFSLGKCVP 120
  121 VCRGDGVYQK GMDFILEKLN HGDWVHIFPE GKVNMSSEFL RFKWGIGRLI AECHLNPIIL 180
  181 PLWHVGMNDV LPNSPPYFPR FGQKITVLIG KPFSTLPVLE RLRAENKSAV EMRKALTDFI 240
  241 QEEFQRLKMQ AEQLHNHFQP GR

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	17.69897
Match:	1iuqA
Description:	The 1.55 A Crystal Structure of Glycerol-3-Phosphate Acyltransferase
Matching Structure (courtesy of the PDB):

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits