YRC Public Data Repository - Protein Structure Prediction

Protein:	ADT2_MOUSE
Organism:	Mus musculus
Length:	298 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ADT2_MOUSE.

Description	E-value	Query Range	Subject Range
gi\|74006830 - gi\|74006830\|ref\|XP_537947.2\| PREDICTED: similar to ADP/ATP translocase 3 (Adenine nucleotide translo...	327.0	[0..1]	[296..173]
gi\|194044922 - gi\|194044922\|ref\|XP_001927475.1\| PREDICTED: similar to adenine nucleotide translocator 2 [Sus scrofa... gi\|186886456, gi... - gi\|187936981\|ref\|NP_001120751.1\| solute carrier family 25 (mitochondrial carrier; adenine nucleotide... ADT2_BOVIN - ADP/ATP translocase 2 OS=Bos taurus GN=SLC25A5 PE=2 SV=3	318.0	[0..1]	[298..1]
gi\|45829841 - gi\|45829841\|gb\|AAH68199.1\| SLC25A5 protein [Homo sapiens]	317.0	[0..1]	[298..26]
gi\|68366574 - gi\|68366574\|ref\|XP_694733.1\| PREDICTED: similar to ADP,ATP carrier protein 2 (ADP/ATP translocase 2)...	316.0	[0..1]	[295..15]
ADT2_RAT - ADP/ATP translocase 2 OS=Rattus norvegicus GN=Slc25a5 PE=1 SV=3	316.0	[0..1]	[298..1]
ADT2_PONAB - ADP/ATP translocase 2 OS=Pongo abelii GN=SLC25A5 PE=2 SV=3 ADT2_PONPY - ADP/ATP translocase 2 - Pongo pygmaeus (Orangutan)	315.0	[0..1]	[298..1]
gi\|114597246 - gi\|114597246\|ref\|XP_517556.2\| PREDICTED: solute carrier family 25 (mitochondrial carrier; adenine nu...	315.0	[0..9]	[297..211]

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Predicted Domain #1

Region A:
Residues: [1-298]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTDAAVSFAK DFLAGGVAAA ISKTAVAPIE RVKLLLQVQH ASKQITADKQ YKGIIDCVVR  60
   61 IPKEQGVLSF WRGNLANVIR YFPTQALNFA FKDKYKQIFL GGVDKRTQFW RYFAGNLASG 120
  121 GAAGATSLCF VYPLDFARTR LAADVGKAGA EREFKGLGDC LVKIYKSDGI KGLYQGFNVS 180
  181 VQGIIIYRAA YFGIYDTAKG MLPDPKNTHI FISWMIAQSV TAVAGLTSYP FDTVRRRMMM 240
  241 QSGRKGTDIM YTGTLDCWRK IARDEGSKAF FKGAWSNVLR GMGGAFVLVL YDEIKKYT

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	84.69897
Match:	1okcA
Description:	structure of mitochondrial ADP/ATP carrier in complex with carboxyatractyloside
Matching Structure (courtesy of the PDB):

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits