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View Structure Prediction Details

Protein: SGF73_SCHPO
Organism: Schizosaccharomyces pombe 972h-
Length: 344 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SGF73_SCHPO.

Description E-value Query
Range
Subject
Range
gi|49108440, gi|... - gi|67900972|ref|XP_680742.1| hypothetical protein AN7473.2 [Aspergillus nidulans FGSC A4], ref|XP_41...
204.0 [0..8] [315..11]
gi|114191609, gi... - gi|115400709|ref|XP_001215943.1| hypothetical protein ATEG_06765 [Aspergillus terreus NIH2624], gi|1...
186.0 [0..50] [315..433]
unc-89 - status:Partially_confirmed UniProt:O01761 protein_id:AAP68958.1
185.0 [0..3] [310..1543]
gi|50728073 - gi|50728073|ref|XP_425421.1| PREDICTED: similar to Hypothetical protein KIAA1218 [Gallus gallus]
180.0 [0..11] [306..1140]
gi|44984311, gi|... - gi|45198424|ref|NP_985453.1| AFL097Cp [Ashbya gossypii ATCC 10895], gi|44984311|gb|AAS53277.1| AFL09...
gi|44984311 - gi|44984311|gb|AAS53277.1| AFL097Cp [Ashbya gossypii ATCC 10895]
175.0 [0..56] [318..52]
gi|46122037, gi|... - gi|46122037|ref|XP_385572.1| hypothetical protein FG05396.1 [Gibberella zeae PH-1], gi|42550874|gb|E...
173.0 [0..41] [329..104]

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Predicted Domain #1
Region A:
Residues: [1-152]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLTEQQTLEL FPENWERNEQ VLLKYPDGLP KDVLADQRVD NTESQVKDEI TSNITNQTQI  60
   61 LLPADSFPQY GSYPNNSELD YVVCTKCDRP FLSEYIEDHH SSCNGIKPPK PQFEPVANSQ 120
  121 VLNKDVNNGN NAPIKNGVKS TAKGSAGNHE KN

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [153-268]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SVNGQKNPEM PPKRRKTEEN KKPTKSALPK KEASKKKNPK VKGPVDVEKQ CGVLLPNGQM  60
   61 CARSLTCKTH SMSSKRAVPG RSQPYDVLLA ACQKKNQVKI QRQILETAKE SEDNQH

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 45.070581
Match: PF08313.3
Description: No description for PF08313.3 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [269-344]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QAPVDSDEEV SFIMNVLQKS GNQPLEQKVF LPVKRRHSYF RTRELIAAAF RHGEQGMQVT  60
   61 GTILGRVIPF SARQPL

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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Created and Maintained by: Michael Riffle