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View Structure Prediction Details

Protein: YQ68_SCHPO
Organism: Schizosaccharomyces pombe 972h-
Length: 134 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YQ68_SCHPO.

Description E-value Query
Range
Subject
Range
gi|112180559 - gi|112180559|gb|AAH19024.3| ORAOV1 protein [Homo sapiens]
157.0 [0..3] [129..33]
gi|109463296, gi... - ref|XP_219536.1| similar to RIKEN cDNA 2210010N10 [Rattus norvegicus], gi|109463296|ref|XP_001066712...
155.0 [0..3] [129..22]
gi|109105134 - gi|109105134|ref|XP_001101386.1| PREDICTED: similar to oral cancer overexpressed 1 isoform 3 [Macaca...
153.0 [0..3] [129..8]
gi|12843058 - gi|12843058|dbj|BAB25842.1| unnamed protein product [Mus musculus]
151.0 [0..3] [128..22]
gi|47188102 - gi|47188102|emb|CAG14846.1| unnamed protein product [Tetraodon nigroviridis]
151.0 [0..3] [128..21]

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Predicted Domain #1
Region A:
Residues: [1-134]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDWEEVTKLE ENEYKRGYDE GILKGIEQGY EEAFLFGLEH AYNKYLLAGE IYGRVCFWLK  60
   61 EENSQHPKIK KAHRHLEQLK SLLESLPTNN ELEETDAGFD SYWNKITAKA KVVSSLLGTK 120
  121 ILPAEKIDAN DGFE

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 54.721246
Match: PF08215.3
Description: No description for PF08215.3 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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Created and Maintained by: Michael Riffle