YRC Public Data Repository - Protein Structure Prediction

Protein:	GEP4_SCHPO
Organism:	Schizosaccharomyces pombe 972h-
Length:	188 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

[What does the above image mean?]

[Show Ginzu Version Information]

Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GEP4_SCHPO.

Description	E-value	Query Range	Subject Range
gi\|85100264 - gi\|85100264\|ref\|XP_960928.1\| hypothetical protein NCU01371 [Neurospora crassa OR74A] gi\|28922461, gi\|... - gi\|32412768\|ref\|XP_326864.1\| hypothetical protein ( (AL353822) conserved hypothetical protein [Neuro...	178.0	[0..1]	[178..4]
gi\|44984061 - gi\|44984061\|gb\|AAS53071.1\| AER392Wp [Ashbya gossypii ATCC 10895] gi\|45190993, gi\|... - gi\|45190993\|ref\|NP_985247.1\| AER392Wp [Ashbya gossypii ATCC 10895], gi\|44984061\|gb\|AAS53071.1\| AER39...	163.0	[0..3]	[188..5]
gi\|39960936, gi\|... - gi\|39960936\|ref\|XP_364641.1\| hypothetical protein MG09486.4 [Magnaporthe grisea 70-15], gb\|EAA53736....	156.0	[0..1]	[180..1]
gi\|190405879 - gi\|190405879\|gb\|EDV09146.1\| conserved hypothetical protein [Saccharomyces cerevisiae RM11-1a] GEP4 - Protein of unknown function required for respiratory growth; detected in highly purified mitochondri... GEP4_YEAST - Phosphatidylglycerophosphatase GEP4, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 /...	153.0	[0..3]	[188..1]
gi\|116206324, gi... - gi\|88183052\|gb\|EAQ90520.1\| conserved hypothetical protein [Chaetomium globosum CBS 148.51], gi\|11620...	148.0	[0..1]	[178..92]
gi\|228772130, gi... - gi\|228987589\|ref\|ZP_04147705.1\| hypothetical protein bthur0001_42590 [Bacillus thuringiensis serovar... gi\|47569332, gi\|... - gi\|47569332\|ref\|ZP_00240016.1\| HAD superfamily (subfamily IIIA) phosphatase, TIGR01668 [Bacillus cer... gi\|228625511, gi... - gi\|229157951\|ref\|ZP_04286023.1\| hypothetical protein bcere0010_41310 [Bacillus cereus ATCC 4342], gi...	138.0	[0..19]	[188..2]
gi\|254736441 - gi\|254736441\|ref\|ZP_05194147.1\| hydrolase, HAD subfamily IIIA [Bacillus anthracis str. Western North... gi\|254741478 - gi\|254741478\|ref\|ZP_05199165.1\| hydrolase, HAD subfamily IIIA [Bacillus anthracis str. Kruger B] gi\|254750917 - gi\|254750917\|ref\|ZP_05202956.1\| hydrolase, HAD subfamily IIIA [Bacillus anthracis str. Vollum] gi\|254757755 - gi\|254757755\|ref\|ZP_05209782.1\| hydrolase, HAD subfamily IIIA [Bacillus anthracis str. Australia 94] gi\|51974637, gi\|... - gi\|52141168\|ref\|YP_085661.1\| hypothetical protein BCZK4082 [Bacillus cereus E33L], gi\|51974637\|gb\|AA... gi\|49187230, gi\|... - gi\|49187230\|ref\|YP_030482.1\| HAD superfamily hydrolase [Bacillus anthracis str. Sterne], gi\|49181157... gi\|167529987, gi... - gi\|167634535\|ref\|ZP_02392855.1\| hydrolase, HAD subfamily IIIA [Bacillus anthracis str. A0442], gi\|16... gi\|49332210, gi\|... - gi\|49480654\|ref\|YP_038390.1\| hypothetical protein BT9727_4072 [Bacillus thuringiensis serovar konkuk... gi\|165873243, gi... - gi\|165873243\|ref\|ZP_02217853.1\| hydrolase, HAD subfamily IIIA [Bacillus anthracis str. A0488], gi\|16... gi\|118479502, gi... - gi\|118479502\|ref\|YP_896653.1\| HAD superfamily hydrolase [Bacillus thuringiensis str. Al Hakam], gi\|1... gi\|217961826, gi... - gi\|217961826\|ref\|YP_002340396.1\| hydrolase, HAD subfamily IIIA [Bacillus cereus AH187], gi\|217066054... gi\|206745758, gi... - gi\|206976006\|ref\|ZP_03236916.1\| hydrolase, HAD subfamily IIIA [Bacillus cereus H3081.97], gi\|2067457... gi\|218537999, gi... - gi\|218905473\|ref\|YP_002453307.1\| hydrolase, HAD subfamily IIIA [Bacillus cereus AH820], gi\|218537999... gi\|30264408, gi\|... - gi\|30264408\|ref\|NP_846785.1\| HAD superfamily hydrolase [Bacillus anthracis str. Ames], gi\|30259066\|g... gi\|170668638, gi... - gi\|170687443\|ref\|ZP_02878660.1\| hydrolase, HAD subfamily IIIA [Bacillus anthracis str. A0465], gi\|17... gi\|47778310, gi\|... - gi\|47778310\|ref\|YP_021208.2\| hydrolase had subfamily iiia [Bacillus anthracis str. 'Ames Ancestor'],... gi\|167513446, gi... - gi\|167638598\|ref\|ZP_02396874.1\| hydrolase, HAD subfamily IIIA [Bacillus anthracis str. A0193], gi\|16... gi\|172081500, gi... - gi\|177653218\|ref\|ZP_02935470.1\| hydrolase, HAD subfamily IIIA [Bacillus anthracis str. A0174], gi\|17... gi\|65321708, gi\|... - gi\|65321708\|ref\|ZP_00394667.1\| COG2179: Predicted hydrolase of the HAD superfamily [Bacillus anthrac... gi\|170707417, gi... - gi\|170707417\|ref\|ZP_02897871.1\| hydrolase, HAD subfamily IIIA [Bacillus anthracis str. A0389], gi\|17... gi\|196034399, gi... - gi\|196034399\|ref\|ZP_03101808.1\| hydrolase, HAD subfamily IIIA [Bacillus cereus W], gi\|195992941\|gb\|E... gi\|190566890, gi... - gi\|190566890\|ref\|ZP_03019806.1\| hydrolase, HAD subfamily IIIA [Bacillus anthracis Tsiankovskii-I], g... gi\|196044933, gi... - gi\|196044933\|ref\|ZP_03112167.1\| hydrolase, HAD subfamily IIIA [Bacillus cereus 03BB108], gi\|19602442... gi\|196029882, gi... - gi\|196039255\|ref\|ZP_03106561.1\| hydrolase, HAD subfamily IIIA [Bacillus cereus NVH0597-99], gi\|19602... gi\|225866317, gi... - gi\|225866317\|ref\|YP_002751695.1\| hydrolase, HAD subfamily IIIA [Bacillus cereus 03BB102], gi\|2257861... gi\|227817113, gi... - gi\|227817113\|ref\|YP_002817122.1\| hydrolase, HAD subfamily IIIA [Bacillus anthracis str. CDC 684], gi... gi\|228916968, gi... - gi\|228916968\|ref\|ZP_04080529.1\| hypothetical protein bthur0012_41810 [Bacillus thuringiensis serovar... gi\|228929381, gi... - gi\|228929381\|ref\|ZP_04092404.1\| hypothetical protein bthur0010_40670 [Bacillus thuringiensis serovar... gi\|228935657, gi... - gi\|228935657\|ref\|ZP_04098471.1\| hypothetical protein bthur0009_41030 [Bacillus thuringiensis serovar... gi\|228948050, gi... - gi\|228948050\|ref\|ZP_04110335.1\| hypothetical protein bthur0007_41770 [Bacillus thuringiensis serovar... gi\|229093406, gi... - gi\|229093406\|ref\|ZP_04224511.1\| hypothetical protein bcere0021_41320 [Bacillus cereus Rock3-42], gi\|... gi\|228659589, gi... - gi\|229123875\|ref\|ZP_04253068.1\| hypothetical protein bcere0016_41610 [Bacillus cereus 95/8201], gi\|2... gi\|228642352, gi... - gi\|229141074\|ref\|ZP_04269616.1\| hypothetical protein bcere0013_41680 [Bacillus cereus BDRD-ST26], gi... gi\|229186576, gi... - gi\|229186576\|ref\|ZP_04313737.1\| hypothetical protein bcere0004_41190 [Bacillus cereus BGSC 6E1], gi\|... gi\|229198464, gi... - gi\|229198464\|ref\|ZP_04325168.1\| hypothetical protein bcere0001_39920 [Bacillus cereus m1293], gi\|228... gi\|229602226, gi... - gi\|229602226\|ref\|YP_002868626.1\| hydrolase, HAD subfamily IIIA [Bacillus anthracis str. A0248], gi\|2... gi\|254684093 - gi\|254684093\|ref\|ZP_05147953.1\| hydrolase, HAD subfamily IIIA [Bacillus anthracis str. CNEVA-9066] gi\|254721927 - gi\|254721927\|ref\|ZP_05183716.1\| hydrolase, HAD subfamily IIIA [Bacillus anthracis str. A1055]	137.0	[0..19]	[188..2]
gi\|42783463, gi\|... - gi\|42783463\|ref\|NP_980710.1\| HAD superfamily hydrolase [Bacillus cereus ATCC 10987], gi\|42739392\|gb\|...	137.0	[0..19]	[188..2]
gi\|25356478 - pir\|\|B83815 hypothetical protein BH1322 [imported] - Bacillus halodurans (strain C-125) gi\|10173938, gi\|... - gi\|15613885\|ref\|NP_242188.1\| hypothetical protein BH1322 [Bacillus halodurans C-125], gi\|10173938\|db...	136.0	[0..19]	[188..3]
gi\|89201414, gi\|... - gi\|89201414\|ref\|ZP_01180155.1\| HAD-superfamily hydrolase subfamily IIIA:HAD-superfamily phosphatase ...	135.0	[0..19]	[188..2]

Back

Predicted Domain #1

Region A:
Residues: [1-188]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLINIEGIQA FCQTIRNPRR IIPHATFPTF SQIPCNINYF LEQKFQVPVD IRALVLDKDN  60
   61 CITLPNETTI AEAELKKIRE FQNIYGEKNV ILLSNSIGTR KLDPTGELAA HFQQKWNIPV 120
  121 VRHSKLKPLC TEELYTYLSN NSHVSSASQI LFIGDRLLTD ITLANIMGSW GVWLTRGVGN 180
  181 TTNMVRSY

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	20.522879
Match:	2oycA
Description:	No description for 2oycA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits