| Protein: | YCT4_SCHPO |
| Organism: | Schizosaccharomyces pombe 972h- |
| Length: | 547 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YCT4_SCHPO.
| Description | E-value | Query Range |
Subject Range |
|
|
244.0 | [0..19] | [544..86] |
|
|
239.0 | [0..10] | [547..44] |
|
|
235.0 | [0..1] | [544..61] |
|
|
231.0 | [0..16] | [547..35] |
|
|
226.0 | [0..5] | [540..27] |
|
|
224.0 | [0..2] | [546..294] |
|
|
221.0 | [0..6] | [546..299] |
|
|
218.0 | [0..10] | [545..592] |
|
|
217.0 | [0..14] | [491..93] |
|
Region A: Residues: [1-84] |
1 11 21 31 41 51
| | | | | |
1 MDYIFLITGY KYRHLNLEAY NAKSRAIENE KRYLGNDRNL PFHREREKVE SNPNSSDEED 60
61 LTSTNNTRSS DNTTSDTEDD SGED
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [85-547] |
1 11 21 31 41 51
| | | | | |
1 SYQVEWESGK DPLAPKNWPM WKKIYTLLVA SFIAIVITAN SSIFSDGGGI AAQQYHVGAT 60
61 VGDLCSATFL LGFAAGSVLF APLSEVYGRL PLYSVTLVIF VVFQIGGGCS KNIWSLVIFR 120
121 FFHGFFGCTP MSACGGTISD LFNPIQRTGA LLVFCAAAFV GPLVGPVMGG YITESKLGWR 180
181 WDFWINMIWA GLTWVIVCFT MPETHSETLL DFKARYLRKK TNCDKWYNEH EHQRDPAYAI 240
241 RTALTRGVRL LCTEPIVQAF CMYLVFINIL LYICMVGYPL IFYQYGFNAG EVGLAILGIL 300
301 VGILLGLALT PIIYVHYRRR YEMRDGNICP EDRLFPLFFG SFFIPIALFW LGWTCYPSVH 360
361 WAAPMVSGIF LGWGFLYVLA VCYSYLVDCY HEMAASALSV ATFTRYAAGG GMTIVARPMY 420
421 NNLNYHWATS LLAFVGCGLV PIPFIFFFWG RRIRQRSPHA YKG
|
| Detection Method: | |
| Confidence: | 32.522879 |
| Match: | 1pw4A |
| Description: | Crystal Structure of the Glycerol-3-Phosphate Transporter from E.Coli |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transporter activity | 4.09176719149278 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 3.59744164024479 | bayes_pls_golite062009 |
| transmembrane transporter activity | 3.5865018981083 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 3.54194478414824 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 2.21266150105753 | bayes_pls_golite062009 |
| cation transmembrane transporter activity | 1.79369588808394 | bayes_pls_golite062009 |
| active transmembrane transporter activity | 1.59419818573076 | bayes_pls_golite062009 |
| organic acid transmembrane transporter activity | 1.24937104052238 | bayes_pls_golite062009 |
| secondary active transmembrane transporter activity | 1.22264637452409 | bayes_pls_golite062009 |
| binding | 1.01584233411372 | bayes_pls_golite062009 |
| alcohol transmembrane transporter activity | 0.924836669821548 | bayes_pls_golite062009 |
| polyol transmembrane transporter activity | 0.924836669821548 | bayes_pls_golite062009 |
| glycerol transmembrane transporter activity | 0.812001619402678 | bayes_pls_golite062009 |
| symporter activity | 0.74591237387473 | bayes_pls_golite062009 |
| solute:cation symporter activity | 0.74591237387473 | bayes_pls_golite062009 |
| cation:sugar symporter activity | 0.143419068761182 | bayes_pls_golite062009 |
| sugar:hydrogen symporter activity | 0.143419068761182 | bayes_pls_golite062009 |
