YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|19113366
Organism:	Schizosaccharomyces pombe 972h-
Length:	184 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|19113366.

Description	E-value	Query Range	Subject Range
gi\|50746002 - gi\|50746002\|ref\|XP_420334.1\| PREDICTED: similar to malignant T cell amplified sequence 1; MCT-1 prot...	213.0	[0..6]	[182..141]
gi\|73949188 - gi\|73949188\|ref\|XP_544278.2\| PREDICTED: similar to malignant T cell amplified sequence 1 [Canis fami...	209.0	[0..6]	[182..160]
gi\|154152173, gi... - gi\|76665894\|ref\|XP_593366.2\| PREDICTED: hypothetical protein isoform 1 [Bos taurus], gi\|154152173\|re...	199.0	[0..6]	[182..3]
ENSCJAT00000004957 - null MCTS1_BOVIN - Malignant T-cell-amplified sequence 1 OS=Bos taurus GN=MCTS1 PE=2 SV=1 gi\|74008257 - gi\|74008257\|ref\|XP_864674.1\| PREDICTED: similar to malignant T cell amplified sequence 1 isoform 3 [... gi\|114690028 - gi\|114690028\|ref\|XP_001137540.1\| PREDICTED: malignant T cell amplified sequence 1 isoform 3 [Pan tro... MCTS1 - malignant T cell amplified sequence 1	199.0	[0..6]	[182..3]
MCS1A_XENLA - Malignant T-cell-amplified sequence 1-A OS=Xenopus laevis GN=mcts1-a PE=2 SV=1	199.0	[0..6]	[182..3]
gi\|109132131 - gi\|109132131\|ref\|XP_001086431.1\| PREDICTED: similar to malignant T cell amplified sequence 1 isoform...	199.0	[0..7]	[182..4]
gi\|55742194 - ref\|NP_001006880.1\| malignant T cell amplified sequence 1 [Xenopus tropicalis] MCTS1_XENTR - Malignant T-cell-amplified sequence 1 OS=Xenopus tropicalis GN=mcts1 PE=2 SV=1	199.0	[0..6]	[182..3]
gi\|149060052 - gi\|149060052\|gb\|EDM10868.1\| malignant T cell amplified sequence 1, isoform CRA_a [Rattus norvegicus] MCTS1_MOUSE - Malignant T-cell-amplified sequence 1 OS=Mus musculus GN=Mcts1 PE=1 SV=1	199.0	[0..6]	[182..3]
gi\|74210538, gi\|... - gi\|74210538\|dbj\|BAE23639.1\| unnamed protein product [Mus musculus], gi\|148697075\|gb\|EDL29022.1\| mali... MCTS1_RAT - Malignant T-cell-amplified sequence 1 OS=Rattus norvegicus GN=Mcts1 PE=2 SV=1	197.0	[0..7]	[182..5]

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Predicted Domain #1

Region A:
Residues: [1-184]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIANLNRFNS REDIKGTTPI KSSIQRGIKA KLVQAYPNLK QVIDELIPKK SQLTQIKCED  60
   61 RLFLYTLNGE IILFQHFDGP IIPSLRLVHK CPDAFTQVRV DRGAIKFLLS GANIMIPGLV 120
  121 SKGGNLPDDI EKDQYVIVTA EGKEAPAAIG LTKMSAKEMK ETNKGIGIEN VHYLGDNLWK 180
  181 TILE

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	34.09691
Match:	2ausC
Description:	No description for 2ausC was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits