| Protein: | LSB5_SCHPO |
| Organism: | Schizosaccharomyces pombe 972h- |
| Length: | 304 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for LSB5_SCHPO.
| Description | E-value | Query Range |
Subject Range |
|
|
270.0 | [0..7] | [287..6] |
|
|
266.0 | [0..7] | [287..6] |
|
|
261.0 | [0..7] | [287..473] |
|
Region A: Residues: [1-162] |
1 11 21 31 41 51
| | | | | |
1 MGIFSETVPI TAVTTYIDRL TSRDTDDEDL SGIVQLSEAV NLTVTGPREA SRTLRKKLKY 60
61 STPHEQVRAL VILQALIENA GSHFLQNFSD EKLEDRMLQC ATNSEYSKPV RKRAIHMIKL 120
121 WHNDYSNVRG MESMSSLVSR LPQRQSSASH SEQPTINLKK VG
|
| Detection Method: |  |
| Confidence: | 50.39794 |
| Match: | 1x5bA |
| Description: | The solution structure of the VHS domain of human Signal transducing adaptor molecule 2 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [163-304] |
1 11 21 31 41 51
| | | | | |
1 PILERLIASS SMAATNLSNS LVRINPNTEN PAKNKQIMVY YVDCKRAHRS LLRYIQAIQD 60
61 EMWLANLLKA NDEIVTAIDA FKEKCSENSD YSSDSGSYSS SYSRHLDDRA SYISRSSSGG 120
121 SNAQRSEDLD VNNPFGDHNR LE
|
| Detection Method: | |
| Confidence: | 16.522879 |
| Match: | 1oxzA |
| Description: | ADP-ribosylation factor binding protein Gga1 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| clathrin binding | 4.2165986983076 | bayes_pls_golite062009 |
| phosphatidylinositol-4,5-bisphosphate binding | 2.2854866638753 | bayes_pls_golite062009 |
| binding | 2.00372346360794 | bayes_pls_golite062009 |
| protein binding | 1.76598379050768 | bayes_pls_golite062009 |
| phosphoinositide binding | 1.69886980741044 | bayes_pls_golite062009 |
| phospholipid binding | 1.35873451348399 | bayes_pls_golite062009 |
| lipid binding | 0.681936854618139 | bayes_pls_golite062009 |
| phosphatidylinositol binding | 0.10007172207713 | bayes_pls_golite062009 |
