| Protein: | YB0B_SCHPO |
| Organism: | Schizosaccharomyces pombe 972h- |
| Length: | 979 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YB0B_SCHPO.
| Description | E-value | Query Range |
Subject Range |
|
|
613.0 | [0..94] | [947..118] |
|
|
599.0 | [0..105] | [947..105] |
|
|
570.0 | [0..154] | [962..167] |
|
|
517.0 | [0..73] | [944..60] |
|
|
508.0 | [0..74] | [941..61] |
|
|
503.0 | [0..26] | [954..115] |
|
|
501.0 | [0..294] | [976..30] |
|
|
489.0 | [0..74] | [944..61] |
|
|
484.0 | [0..151] | [949..148] |
|
|
480.0 | [0..74] | [896..61] |
|
Region A: Residues: [1-128] |
1 11 21 31 41 51
| | | | | |
1 METNFEDSKS LDEPVLHDIA IALLKNDYWS LYLSPEQKRK YISILNDTLL WNRFINVIEW 60
61 DKLCDEKDSN GSNDDEEDDL DITTLFRCRC MIFDAKINPA LFDLSSTSSG SIEHVDHQNI 120
121 SLEASLAE
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [129-275] |
1 11 21 31 41 51
| | | | | |
1 EEERKKGDAK KSEATGRQLF DDDDFDESDA EDSSKATITL DLQKDKSLRK SIIDLKSVDI 60
61 DDMDTSGFAA IESNKALSNI SFNYVYYTLE NDSENINEVK KFEDEEDTST PNTSSFQNNS 120
121 SSLDLSDNLS YLLQYLEGNR SKINATD
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [276-574] |
1 11 21 31 41 51
| | | | | |
1 ADVKQLLSDV KKNKSKWAND QRIGQEELYE AAEKVVLELR SYTEHSLAFL TKVSKRDAPD 60
61 YYTVIKEPMD LGTILRNLKN LHYNSKKEFV HDLMLIWSNC FLYNSHPDHP LRVHAQFMKD 120
121 KSLELINLIP DIVIQSRKDY DDSLIEAELE SDEESTAETS KHVTSKKTSS RGGQTQQAVE 180
181 VHTDANSPEE NNTPVTKKEV ETSKPPAVSG STPPVNEAAV IESSNTLEKE PLSDVATEYW 240
241 KIKTKDIRES HILNNRRILK SLQFIETELP MIRKPTAMSA FIDREVAYGS IDCLPMDKG
|
| Detection Method: | |
| Confidence: | 33.522879 |
| Match: | 1eqfA |
| Description: | TAFII250 double bromodomain module |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [575-656] |
1 11 21 31 41 51
| | | | | |
1 DFEPIMKLDT TPLLEYDVGS GVPMTAGSVL ETESEEDLYF RDYSLFEINR NTPGVPSLMY 60
61 KNIAKMQEIR KLCNKIQTVR QL
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [657-765] |
1 11 21 31 41 51
| | | | | |
1 QLPQPFYYEH HKSHVPFANN EPILLDIPQN YDNMSSFKPL AHDVLKKLCT IILFHAGFES 60
61 FQMGALDALT EIAADYMAKM GAVMDQYLIY GKDKSQQEIV GQTLGELGV
|
| Detection Method: | |
| Confidence: | 1.03 |
| Match: | 1eqzD |
| Description: | Histone H4 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [766-979] |
1 11 21 31 41 51
| | | | | |
1 DDVNDLISYV YHDVERQSVK LLEIHQRLQR HFVELLRPAL SERNDEEAIF NQNGESFVTG 60
61 NFSYETGDDF FGLRELGLDR ELGLDSLSVP LHLLQSRLRS NMSWQPEATI KGDQEYAPPP 120
121 KYPPITAESI SNEIGLIQGF LKKNLEEFGL DELLEDEDIR PRSKPPRPRL PPNGKITTGR 180
181 KRIASSVFLN QSLRKKRCLK ENEQGTEVTT LPEE
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
