| Protein: | VPS91_SCHPO |
| Organism: | Schizosaccharomyces pombe 972h- |
| Length: | 537 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for VPS91_SCHPO.
| Description | E-value | Query Range |
Subject Range |
|
|
365.0 | [0..27] | [445..301] |
|
|
363.0 | [0..2] | [461..170] |
|
|
362.0 | [0..2] | [461..380] |
|
|
358.0 | [0..2] | [461..42] |
|
|
358.0 | [0..2] | [461..42] |
|
|
353.0 | [0..17] | [462..273] |
|
|
351.0 | [0..2] | [461..42] |
|
|
351.0 | [0..2] | [461..42] |
|
Region A: Residues: [1-110] |
1 11 21 31 41 51
| | | | | |
1 MDYPSFHEDP TKDESTVAEQ RKGQSNEEKP LIDLNDSLDE QRNAYNEHCK NHDQQPSQQV 60
61 RNMEDEANQY EQTDSSSDQE VMNEKQSLDK ENRNDNIPHE NNPGQQEINE
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [111-379] |
1 11 21 31 41 51
| | | | | |
1 PIFDFHMFLE QLRSSSAEPV AKYLKSFLSE FTKRRWTVNY QVKLIRDFLK FINEKIEQYE 60
61 PWASGSQAEI DNAKEGMEKL VLNRLYTSLF SPEIAKSGIP LSSEHSDDVE EDRVLSEKME 120
121 LFQWITEENL DIKKQKSSSK FFKLAADELR RINDYHAPRD KIICLLNCCK VIFSYLRNVV 180
181 KEESADMFVP ILIFVVLQAR PAHLVSNIQY IQRFRSPEKL TGEVMYYLST LMGAMSFIET 240
241 LDCSSLTITE EEFNAQIEKS IKKMEERKL
|
| Detection Method: | |
| Confidence: | 68.30103 |
| Match: | 1txuA |
| Description: | Crystal Structure of the Vps9 Domain of Rabex-5 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| protein binding | 1.53503231216012 | bayes_pls_golite062009 |
| GTPase activating protein binding | 1.51214503459935 | bayes_pls_golite062009 |
| binding | 1.43845202356718 | bayes_pls_golite062009 |
| enzyme regulator activity | 0.345541740813359 | bayes_pls_golite062009 |
| nucleoside-triphosphatase regulator activity | 0.275905530501797 | bayes_pls_golite062009 |
| GTPase regulator activity | 0.242420370175624 | bayes_pls_golite062009 |
| guanyl-nucleotide exchange factor activity | 0.180034469254504 | bayes_pls_golite062009 |
|
Region A: Residues: [380-537] |
1 11 21 31 41 51
| | | | | |
1 SEKSESKTAV NENATYKDPV LSRGLSSSID VSTGVALVNL PEELENMKYL QIDTPESKEY 60
61 PRSTRPRALL IVALSQLILE KDHAETQTSM LVLAIDLPIE YLVHIPRLLP ILPSFMKSSQ 120
121 WMMDYNKMMT CERQQQRLLR QLKLKGYKLG KRLKQLRL
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.477 | a.118.1 | ARM repeat |
| View | Download | 0.551 | a.118.9 | ENTH/VHS domain |
| View | Download | 0.334 | a.60.9 | lambda integrase-like, N-terminal domain |
| View | Download | 0.545 | a.7.6 | Ribosomal protein S20 |
| View | Download | 0.320 | a.118.9 | ENTH/VHS domain |
